Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTCAO00442 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTCAO00442 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
RTCAO00442 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.9□□□□□ -1.78
RTCAO00442 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTCAO00442 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTCAO00442 DEFB109C-201ENST00000382575 264 ntBASIC3.9□□□□□ -1.79
RTCAO00442 DEFB109B-201ENST00000382656 264 ntBASIC3.9□□□□□ -1.79
RTCAO00442 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RTCAO00442 MCTS2P-201ENST00000394552 546 ntBASIC3.9□□□□□ -1.79
RTCAO00442 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.9□□□□□ -1.79
RTCAO00442 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 AC004552.1-201ENST00000419089 348 ntBASIC3.9□□□□□ -1.79
RTCAO00442 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 AL358472.1-201ENST00000431295 329 ntBASIC3.9□□□□□ -1.79
RTCAO00442 USP9YP31-201ENST00000431405 881 ntBASIC3.9□□□□□ -1.79
RTCAO00442 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 HMGN2P20-201ENST00000437531 273 ntBASIC3.9□□□□□ -1.79
RTCAO00442 RPS4XP4-201ENST00000443195 763 ntBASIC3.9□□□□□ -1.79
RTCAO00442 MTCYBP42-201ENST00000444653 1130 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 HMGB1P15-201ENST00000453854 435 ntBASIC3.9□□□□□ -1.79
RTCAO00442 RPL36AP13-201ENST00000457490 317 ntBASIC3.9□□□□□ -1.79
RTCAO00442 RPS26P3-201ENST00000470205 348 ntBASIC3.9□□□□□ -1.79
RTCAO00442 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 AC090543.2-201ENST00000483963 348 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC004057.1-201ENST00000485827 348 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 MTCYBP37-201ENST00000510642 1133 ntBASIC3.9□□□□□ -1.79
RTCAO00442 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.9□□□□□ -1.79
RTCAO00442 AC108064.1-201ENST00000513791 460 ntBASIC3.9□□□□□ -1.79
RTCAO00442 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 MRPL49P2-201ENST00000521066 465 ntBASIC3.9□□□□□ -1.79
RTCAO00442 MTND2P32-201ENST00000521584 1038 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.9□□□□□ -1.79
RTCAO00442 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.9□□□□□ -1.79
RTCAO00442 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 CYP2C60P-201ENST00000566088 139 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.9□□□□□ -1.79
RTCAO00442 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.9□□□□□ -1.79
RTCAO00442 MIR4509-3-201ENST00000578671 94 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.9□□□□□ -1.79
RTCAO00442 AC012417.1-201ENST00000582307 1039 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.9□□□□□ -1.79
RTCAO00442 MIR4509-2-201ENST00000583920 94 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC006116.5-201ENST00000591936 559 ntBASIC3.9□□□□□ -1.79
RTCAO00442 Z82195.1-201ENST00000604558 398 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC002487.1-201ENST00000604565 994 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC112220.2-201ENST00000605513 533 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AL451086.1-201ENST00000605596 223 ntBASIC3.9□□□□□ -1.79
RTCAO00442 AC027449.1-201ENST00000608890 407 ntBASIC3.9□□□□□ -1.79
RTCAO00442 MIR4509-1-201ENST00000618224 94 ntBASIC3.9□□□□□ -1.79
RTCAO00442 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 AC090506.2-201ENST00000624521 419 ntBASIC3.9□□□□□ -1.79
RTCAO00442 ZNF663P-202ENST00000641770 1131 ntBASIC3.9□□□□□ -1.79
RTCAO00442 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RTCAO00442 AC024560.2-201ENST00000507981 1497 ntBASIC3.9□□□□□ -1.79
RTCAO00442 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTCAO00442 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
RTCAO00442 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 AC010733.2-201ENST00000589496 5702 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC118273.1-201ENST00000525324 3006 ntBASIC3.89□□□□□ -1.79
RTCAO00442 OR11H4-201ENST00000315409 1082 ntBASIC3.89□□□□□ -1.79
RTCAO00442 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
RTCAO00442 RN7SKP33-201ENST00000410942 340 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCAO00442 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCAO00442 FNDC3CP-201ENST00000420795 1155 ntBASIC3.89□□□□□ -1.79
RTCAO00442 RPL21P109-201ENST00000422213 475 ntBASIC3.89□□□□□ -1.79
RTCAO00442 C4BPAP2-201ENST00000428434 478 ntBASIC3.89□□□□□ -1.79
RTCAO00442 GTF2IP3-201ENST00000433887 494 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AL590103.1-201ENST00000434488 307 ntBASIC3.89□□□□□ -1.79
RTCAO00442 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCAO00442 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RTCAO00442 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCAO00442 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCAO00442 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCAO00442 DUXAP8-207ENST00000456786 622 ntBASIC3.89□□□□□ -1.79
RTCAO00442 snoU13.4-201ENST00000458916 104 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC108729.1-201ENST00000487812 947 ntBASIC3.89□□□□□ -1.79
RTCAO00442 RN7SL604P-201ENST00000492589 296 ntBASIC3.89□□□□□ -1.79
RTCAO00442 RPL21P131-201ENST00000497298 483 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.89□□□□□ -1.79
RTCAO00442 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 AC048346.1-201ENST00000510247 144 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC093752.1-206ENST00000511823 336 ntBASIC3.89□□□□□ -1.79
RTCAO00442 SNORA19.3-201ENST00000516165 130 ntBASIC3.89□□□□□ -1.79
RTCAO00442 RNA5SP135-201ENST00000517019 125 ntBASIC3.89□□□□□ -1.79
RTCAO00442 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
RTCAO00442 OR5M7P-201ENST00000526140 972 ntBASIC3.89□□□□□ -1.79
RTCAO00442 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.89□□□□□ -1.79
RTCAO00442 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RTCAO00442 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCAO00442 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms