Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RNU6-374P-201ENST00000364146 108 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MT-TC-201ENST00000387405 66 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ATP5F1P4-201ENST00000397288 746 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 SSXP10-201ENST00000402595 565 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPL21P66-201ENST00000426566 466 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPL21P110-201ENST00000433345 446 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPL5P24-201ENST00000463742 885 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC010307.1-201ENST00000467206 836 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 VN1R17P-201ENST00000472048 1090 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RN7SKP83-201ENST00000516512 178 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 IGKV2D-36-201ENST00000518643 226 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 OR5B10P-201ENST00000532869 642 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MIR3922-201ENST00000585192 84 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 KLKP1-201ENST00000595979 403 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC090425.2-201ENST00000608818 501 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC096586.1-201ENST00000610267 561 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RMST_10.1-201ENST00000616309 154 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL163051.2-201ENST00000618976 735 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL357559.1-201ENST00000622228 274 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC243312.2-201ENST00000623340 601 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC00561-201ENST00000565815 2738 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV11-1A0A0K0K1C0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MIR7-3-201ENST00000384898 110 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 HMGN2P8-201ENST00000391458 268 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 ATP5F1P6-201ENST00000402768 767 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 TOMM22P1-201ENST00000418578 312 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 DBIP2-201ENST00000419076 262 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 CYCSP4-201ENST00000429682 331 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 USP9YP31-201ENST00000431405 881 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC010881.1-201ENST00000433830 235 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 HMGB1P12-201ENST00000438594 598 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPS26P30-201ENST00000443431 335 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RPL21P23-201ENST00000446654 460 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MTND2P3-201ENST00000452458 470 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 BX248409.1-201ENST00000455497 255 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC026616.1-201ENST00000523157 525 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AP000619.3-201ENST00000535634 1127 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL133457.1-201ENST00000564251 987 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC006023.2-201ENST00000609916 167 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC012314.7-201ENST00000619693 93 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC244100.1-202ENST00000621554 382 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 AL732372.2-225ENST00000642124 456 ntBASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV11-1A0A0K0K1C0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms