Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 DEFB131E-202ENST00000602581 683 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 U73023.1-201ENST00000603134 700 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC091488.1-201ENST00000604239 660 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC092354.1-201ENST00000606057 376 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC104073.3-201ENST00000610942 955 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC114781.5-201ENST00000615297 108 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC243756.2-201ENST00000618406 463 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL356121.2-201ENST00000624715 780 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC006065.6-201ENST00000625201 545 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 MTND4P4-201ENST00000439033 1366 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC092104.1-201ENST00000497346 1441 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL451142.2-201ENST00000429076 2090 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 U3.4-201ENST00000363352 213 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RNU4-75P-201ENST00000364621 146 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MIR1193-201ENST00000408109 78 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MIR1284-201ENST00000408337 120 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RN7SKP263-201ENST00000411194 309 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 TPMTP3-201ENST00000411928 735 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 VDAC1P9-201ENST00000412766 841 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 EIF4HP2-201ENST00000424380 563 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC004865.1-201ENST00000442276 1003 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL121877.1-201ENST00000453704 622 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-956P-201ENST00000458868 103 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RN7SL98P-201ENST00000462271 300 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-1261P-201ENST00000517194 104 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MYL12AP1-201ENST00000518490 515 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 OR7K1P-201ENST00000546439 926 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 PSMB7P1-201ENST00000556349 514 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC007224.1-201ENST00000564410 144 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AGGF1P4-201ENST00000568249 801 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MIR3160-1-201ENST00000577972 85 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MIR3138-201ENST00000585238 82 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MTCYBP22-201ENST00000603788 447 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC128687.1-201ENST00000605304 619 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 MIR7844-201ENST00000616161 122 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AL590240.3-201ENST00000621416 943 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC092184.1-201ENST00000625042 715 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC026634.1-201ENST00000634369 198 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 AC092435.4-201ENST00000623012 4159 ntBASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX2IPQ9Y2D8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 Z73965.1-201ENST00000623412 2297 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC011155.1-201ENST00000316512 456 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RNU1-108P-201ENST00000362556 161 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RNU4-21P-201ENST00000362802 126 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 CYCSP45-201ENST00000402289 315 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 ARL4AP5-201ENST00000404372 599 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms