Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 RPL21P17-201ENST00000397467 475 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AL589655.1-201ENST00000405398 482 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 EI24P1-201ENST00000416584 867 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC006960.1-201ENST00000419980 153 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC005517.2-201ENST00000424673 553 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 B3GNT2P1-201ENST00000434960 952 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 RPL6P5-201ENST00000445678 828 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC007688.1-201ENST00000475592 759 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC005726.1-201ENST00000494679 427 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 RN7SKP13-201ENST00000515933 244 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC010198.2-201ENST00000550612 259 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 MIR7851-201ENST00000610611 160 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 SNORD39.4-201ENST00000620099 78 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 NSRP1P1-201ENST00000444067 1693 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC009501.3-201ENST00000605001 1352 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 RNA5SP119-201ENST00000362715 117 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SNORD17-201ENST00000390930 237 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 HMGB3P23-201ENST00000414981 585 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 Z99127.3-201ENST00000448158 395 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC073522.1-201ENST00000483312 377 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 OR9N1P-202ENST00000494289 481 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 RN7SKP116-201ENST00000516902 319 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 C1DP5-201ENST00000525775 383 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC103843.2-201ENST00000530523 682 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AL442163.2-201ENST00000553912 710 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC012414.2-201ENST00000559474 187 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC005242.1-201ENST00000585658 438 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC005972.3-201ENST00000606304 481 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC011374.2-201ENST00000607135 526 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MIR6748-201ENST00000610433 71 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC026951.1-201ENST00000559530 2459 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VAPAQ9P0L0 AL365440.1-201ENST00000436135 2167 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 MTCO1P8-201ENST00000416914 1523 ntBASIC3.14□□□□□ -1.91
VAPAQ9P0L0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 AC016716.1-201ENST00000265882 708 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
VAPAQ9P0L0 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VAPAQ9P0L0 EIF5P1-201ENST00000400019 1231 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms