Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AL354760.1-201ENST00000608357 643 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 MIR7975-201ENST00000619350 68 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AL162233.1-201ENST00000620014 944 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 PRO1804-201ENST00000623780 2050 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC073346.2-201ENST00000624724 2058 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 RNU6-837P-201ENST00000391056 108 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 SFR1P1-201ENST00000403720 688 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 ARF4P2-201ENST00000430209 526 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL159987.2-201ENST00000432754 307 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 RSL24D1P8-201ENST00000434442 492 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 SLC31A1P1-201ENST00000451221 567 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 MTCO3P35-201ENST00000485582 781 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 RPL7P24-201ENST00000493052 752 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC005726.1-201ENST00000494679 427 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC104108.1-201ENST00000509930 412 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 RNU6-488P-201ENST00000515918 99 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC109635.4-202ENST00000531666 412 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 OR5B10P-201ENST00000532869 642 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC025918.2-201ENST00000558683 763 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC006960.3-201ENST00000561845 705 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC107954.1-201ENST00000565906 727 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 ELOCP35-201ENST00000604289 336 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 KATNBL1P1-201ENST00000605192 748 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC107308.1-201ENST00000615897 301 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 PLCE1P1-201ENST00000622094 305 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC068620.4-201ENST00000636730 1182 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 AC119674.1-207ENST00000641355 633 ntBASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TM9SF3Q9HD45 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 MTCO1P18-201ENST00000455518 1419 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RNU6-1339P-201ENST00000363574 91 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RPL23AP47-201ENST00000408017 460 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RNU6-272P-201ENST00000411028 104 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 YWHAZP8-201ENST00000436935 731 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RPS17P13-201ENST00000448974 407 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 CYCSP35-201ENST00000451978 304 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 MTCO3P16-201ENST00000454456 754 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 WBP1LP4-201ENST00000505043 344 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 SNORA74D-201ENST00000516404 141 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 RN7SKP116-201ENST00000516902 319 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL133457.1-201ENST00000564251 987 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 MIR3200-201ENST00000580767 85 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL355802.4-201ENST00000607635 548 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AC243312.2-201ENST00000623340 601 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL109659.3-201ENST00000624985 950 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms