Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 EDDM3DP-201ENST00000554692 434 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 MIR5186-201ENST00000577504 120 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 MIR4307-201ENST00000582802 84 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC091979.2-201ENST00000607514 214 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC131902.3-201ENST00000611767 581 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL596275.2-204ENST00000641628 552 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL596275.2-206ENST00000641957 626 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 OR5H6-203ENST00000642105 978 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC004520.1-201ENST00000608362 1413 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AL359922.3-201ENST00000624779 1670 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MIR195-201ENST00000385194 87 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 BTF3P7-201ENST00000407097 488 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MIR1305-201ENST00000408300 86 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RPL6P29-201ENST00000414863 865 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 OR8F1P-201ENST00000425243 930 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 IPMKP1-201ENST00000425988 855 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC109583.1-201ENST00000432156 268 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC092647.2-201ENST00000452998 253 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RPS15AP17-201ENST00000470598 390 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RPS3AP17-201ENST00000472594 777 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL481P-201ENST00000477764 299 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL817P-201ENST00000480777 288 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RPS4XP18-201ENST00000495480 763 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-314P-201ENST00000516574 104 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 NRON-201ENST00000517270 370 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC092490.3-201ENST00000545370 572 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MTCO3P24-201ENST00000572729 782 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC090578.1-201ENST00000604955 591 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC087783.2-201ENST00000605070 562 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AF250324.2-201ENST00000608299 610 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC090517.2-201ENST00000614966 680 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC008250.2-201ENST00000615261 205 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AP001506.1-201ENST00000615444 211 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL722P-201ENST00000617780 284 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL565P-201ENST00000618246 284 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 U6.101-201ENST00000637707 76 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 AP002907.1-201ENST00000606361 1430 ntBASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.54□□□□□ -1.68
AMBRA1Q9C0C7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms