Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPL34P26-201ENST00000445636 354 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 RPL12P26-201ENST00000452430 487 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC010468.1-201ENST00000461022 817 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC107398.1-201ENST00000486904 505 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 RN7SL504P-201ENST00000494496 287 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 MTCO1P31-201ENST00000506355 492 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 RPL23AP94-201ENST00000512518 302 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 SCARNA20.6-201ENST00000517251 106 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 MIR3186-201ENST00000577404 85 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC015802.5-201ENST00000607478 399 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC103710.3-201ENST00000608157 948 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC024341.1-201ENST00000526444 1552 ntBASIC4.05□□□□□ -1.76
RPAP1Q9BWH6 AC119744.1-201ENST00000454746 1715 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 RNU1-75P-201ENST00000347264 129 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AL513174.1-201ENST00000423182 629 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 RPL7P44-201ENST00000424827 742 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC008264.1-201ENST00000447612 367 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC087312.1-201ENST00000471411 480 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AL049830.2-201ENST00000480072 201 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 RPL7P23-201ENST00000493874 747 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC107934.2-201ENST00000518653 310 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC007423.1-201ENST00000605009 627 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AP004607.9-201ENST00000618202 316 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AC015726.3-201ENST00000624501 418 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 AL353743.1-202ENST00000431724 1695 ntBASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RPAP1Q9BWH6 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RPL23AP57-201ENST00000332361 466 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RNU6-317P-201ENST00000384031 107 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RNU4-31P-201ENST00000384211 141 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RNU6-40P-201ENST00000384254 107 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 UBA52P6-201ENST00000399822 382 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 MIR1289-1-201ENST00000408836 144 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CBX1P4-201ENST00000439415 457 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 FTH1P25-201ENST00000447665 469 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AC097262.1-201ENST00000452559 548 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RPL27AP5-201ENST00000469428 449 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CYCSP20-201ENST00000473154 315 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 HMGB1P21-201ENST00000502313 581 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CR589904.2-201ENST00000612533 440 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 AC123768.4-201ENST00000616244 701 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CR383658.2-201ENST00000547576 1525 ntBASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.03□□□□□ -1.76
RPAP1Q9BWH6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
RPAP1Q9BWH6 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 RNU6-452P-201ENST00000384406 107 ntBASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 Y_RNA.510-201ENST00000384511 114 ntBASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 MTCO3P31-201ENST00000405526 789 ntBASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 RNA5SP229-201ENST00000410809 99 ntBASIC4.02□□□□□ -1.77
RPAP1Q9BWH6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms