Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RPL37P3-201ENST00000456825 293 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RN7SL442P-201ENST00000473804 320 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RPS3AP50-201ENST00000487064 803 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 RNU6-311P-201ENST00000516224 102 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 snoZ278.1-201ENST00000517059 112 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 IGJP1-201ENST00000522682 475 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 MTCO3P15-201ENST00000526563 574 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AP001542.2-201ENST00000593141 364 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL035411.2-201ENST00000604022 421 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC013244.1-201ENST00000604279 193 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC002487.1-201ENST00000604565 994 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL450336.1-201ENST00000605180 586 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AL354760.1-201ENST00000608357 643 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AP001148.1-201ENST00000624124 2359 ntBASIC3.65□□□□□ -1.83
CCDC28BQ9BUN5 AC005261.4-201ENST00000600047 1385 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AL139128.1-201ENST00000413921 941 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC007390.1-201ENST00000415722 356 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AL691449.1-201ENST00000426570 421 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 BX679664.1-201ENST00000434429 253 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 MTND1P33-201ENST00000446251 917 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC069528.1-202ENST00000482888 637 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC021146.5-201ENST00000503544 545 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP164-201ENST00000516533 110 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 HMGB1P23-201ENST00000518743 568 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AP003730.1-201ENST00000524605 285 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC100827.5-201ENST00000615883 426 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC018926.3-201ENST00000618841 406 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AL121895.2-201ENST00000619558 447 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 AC006963.1-201ENST00000624003 1052 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 DCAF13P1-201ENST00000495256 1330 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 MTND5P27-201ENST00000428871 1720 ntBASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC28BQ9BUN5 GABPAP-201ENST00000419271 1356 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC073429.2-201ENST00000569694 1444 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP97-201ENST00000365006 84 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP167-201ENST00000365461 116 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL136116.1-201ENST00000403591 381 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL136310.1-201ENST00000404926 654 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RNU2-65P-201ENST00000410162 185 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 HMGB3P20-201ENST00000417997 600 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 GTF2IP23-201ENST00000423746 351 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL009174.1-201ENST00000426577 416 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms