Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 RNA5SP472-201ENST00000363868 119 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 MIR215-201ENST00000384858 110 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AL030996.1-201ENST00000411430 235 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC092809.3-201ENST00000415453 231 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 EIF4EP2-201ENST00000422816 654 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC009244.1-201ENST00000450566 258 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 RPS26P11-201ENST00000463445 348 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 RPS26P6-201ENST00000475156 348 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 RN7SL518P-201ENST00000491887 280 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 SNORA25.14-201ENST00000516481 132 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 ERHP1-201ENST00000523006 310 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 MIR744-201ENST00000578242 98 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 MIR5682-201ENST00000584864 76 ntBASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USB1Q9BQ65 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
USB1Q9BQ65 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.21□□□□□ -1.41
USB1Q9BQ65 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
USB1Q9BQ65 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USB1Q9BQ65 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.21□□□□□ -1.41
USB1Q9BQ65 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 RNU1-76P-201ENST00000362903 159 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 SNORD50B-201ENST00000364995 70 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 RNU6-1081P-201ENST00000384537 107 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 RN7SKP254-201ENST00000410685 310 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 EI24P4-201ENST00000423683 1078 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 AL353662.1-201ENST00000439099 327 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 NDUFB4P9-201ENST00000511646 388 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 IGLVIV-53-201ENST00000520107 367 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC126177.3-201ENST00000551839 688 ntBASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.21□□□□□ -1.42
USB1Q9BQ65 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USB1Q9BQ65 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC011455.2-201ENST00000599320 3336 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC092079.1-201ENST00000558620 1985 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 HSPA8P1-201ENST00000425843 1833 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC093849.1-201ENST00000563631 2209 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms