Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SNORA70.19-201ENST00000516717 90 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AP000619.3-201ENST00000535634 1127 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 VN1R87P-201ENST00000596706 487 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AC024220.1-201ENST00000603675 484 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AC063944.3-201ENST00000609969 533 ntBASIC4.91□□□□□ -1.62
SIN3AQ96ST3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.91□□□□□ -1.62
SIN3AQ96ST3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.9□□□□□ -1.62
SIN3AQ96ST3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
SIN3AQ96ST3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SIN3AQ96ST3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 OR10J6P-201ENST00000289731 930 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 RNU6-98P-201ENST00000384173 107 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC073136.2-201ENST00000417282 849 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC009263.1-201ENST00000441193 1239 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 OR51B8P-201ENST00000449892 769 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 ZNF971P-201ENST00000562068 1249 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC022884.3-201ENST00000579571 248 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC005412.1-201ENST00000580812 1049 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 MTCO2P2-201ENST00000591258 225 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AL160237.3-201ENST00000604114 1013 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC090525.3-201ENST00000605601 189 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 AC139713.2-210ENST00000641741 992 ntBASIC4.9□□□□□ -1.63
SIN3AQ96ST3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIN3AQ96ST3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AL133383.2-201ENST00000622958 2336 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 ZNF29P-201ENST00000225587 168 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 MIR423-201ENST00000362201 94 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 MIR208A-201ENST00000362287 71 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AP002088.1-201ENST00000382740 395 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RNVU1-14-201ENST00000384770 164 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RNU2-65P-201ENST00000410162 185 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RPL7P29-201ENST00000437151 728 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RPL12P26-201ENST00000452430 487 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC091153.1-201ENST00000466297 402 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC093752.1-206ENST00000511823 336 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AGGF1P5-201ENST00000567900 919 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RPP40P2-201ENST00000603596 712 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AL157392.4-201ENST00000609756 345 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC243654.2-201ENST00000612843 443 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AL354976.1-201ENST00000613843 387 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC012314.7-201ENST00000619693 93 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC104985.3-201ENST00000623479 597 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 AC004777.1-201ENST00000624317 287 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 U6.107-201ENST00000637108 79 ntBASIC4.89□□□□□ -1.63
SIN3AQ96ST3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.89□□□□□ -1.63
SIN3AQ96ST3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.88□□□□□ -1.63
SIN3AQ96ST3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIN3AQ96ST3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIN3AQ96ST3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIN3AQ96ST3 SNORA62.2-201ENST00000364672 152 ntBASIC4.88□□□□□ -1.63
SIN3AQ96ST3 MCTS2P-201ENST00000394552 546 ntBASIC4.88□□□□□ -1.63
SIN3AQ96ST3 RN7SKP111-201ENST00000410349 271 ntBASIC4.88□□□□□ -1.63
SIN3AQ96ST3 AC127526.1-201ENST00000417526 366 ntBASIC4.88□□□□□ -1.63
SIN3AQ96ST3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms