Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RNA5SP356-201ENST00000515972 94 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AC007998.5-201ENST00000622938 237 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 RPL5P19-201ENST00000404228 893 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 NCSTNP1-201ENST00000406229 144 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 EIF2S2P4-201ENST00000461070 984 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 RPL21P71-201ENST00000465598 459 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AC090525.1-201ENST00000479116 478 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 PDCD5P1-201ENST00000543528 309 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 H3F3AP1-201ENST00000559984 334 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 AL590240.3-201ENST00000621416 943 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 CR382285.2-201ENST00000624662 1495 ntBASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP2Q96SN8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CDK5RAP2Q96SN8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 MTCO1P24-201ENST00000515438 1558 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 RN7SKP285-201ENST00000410137 318 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 AC006960.1-201ENST00000419980 153 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 AL138787.1-202ENST00000437804 898 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 RNA5SP367-201ENST00000516557 118 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 MIR3162-201ENST00000581818 82 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 AC007318.2-201ENST00000620999 243 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 AC000403.1-201ENST00000613696 3585 ntBASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDK5RAP2Q96SN8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AL109933.2-201ENST00000452651 260 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 METTL15P1-201ENST00000481421 1045 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 MIR5047-201ENST00000579212 100 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 OR2AS2P-201ENST00000606902 342 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC023813.4-201ENST00000607580 580 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 MIR449A-201ENST00000362113 91 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 RNU1-112P-201ENST00000364401 164 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC068305.1-201ENST00000497406 726 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC004832.5-201ENST00000608677 401 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC245100.7-201ENST00000609678 442 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 MIR6715A-201ENST00000615929 79 ntBASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
CDK5RAP2Q96SN8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 U3.6-201ENST00000363622 211 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AC087499.2-201ENST00000432861 149 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AC092045.1-201ENST00000495716 1231 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 RN7SKP43-201ENST00000516173 320 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 AL137790.1-201ENST00000634283 177 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 ZNF542P-204ENST00000482727 1305 ntBASIC3.44□□□□□ -1.86
CDK5RAP2Q96SN8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 RNA5SP126-201ENST00000365092 109 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 ST13P14-201ENST00000474095 734 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 VTA1P2-201ENST00000520205 911 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 AP000919.1-202ENST00000581139 1264 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 OR5J1P-201ENST00000313544 939 ntBASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDK5RAP2Q96SN8 RPL21P3-201ENST00000395517 478 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms