Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 RNA5SP391-201ENST00000363456 119 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 RNU5E-5P-201ENST00000365379 116 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 SNORA66-201ENST00000384792 133 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 Z97832.1-201ENST00000402490 328 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 EIF1P1-201ENST00000421436 341 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL139415.2-201ENST00000431968 163 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL022238.1-201ENST00000442557 355 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 PDSS1P2-201ENST00000449397 678 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 TCEA1P1-201ENST00000449716 880 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 MTCO3P2-201ENST00000457365 171 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC091564.1-201ENST00000464563 479 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 RN7SL41P-201ENST00000476144 297 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 RPL30P11-201ENST00000495304 339 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC004980.4-201ENST00000513375 203 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AP001922.4-201ENST00000526967 290 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 CYCSP28-201ENST00000534284 321 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC110743.1-201ENST00000584870 478 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC104785.1-201ENST00000603220 588 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AP000403.1-201ENST00000603349 851 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC105254.2-201ENST00000603636 436 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC007684.1-201ENST00000609671 477 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC024941.1-201ENST00000612250 334 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC009704.2-201ENST00000618739 483 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 MIR7154-201ENST00000620673 73 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC095031.1-201ENST00000623685 672 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 AL353662.3-201ENST00000625131 237 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 OR4G11P-202ENST00000642116 1414 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 AC009229.4-201ENST00000623854 1947 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 GDI2P1-201ENST00000429312 1336 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 MAPK10-303ENST00000641324 3959 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX18Q96RF0 THAP12P4-201ENST00000528321 2266 ntBASIC4.42□□□□□ -1.7
SNX18Q96RF0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX18Q96RF0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 AC117529.2-201ENST00000512159 2068 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 AC009643.2-201ENST00000603543 1448 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 RNY4P24-201ENST00000362735 96 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 MIR649-201ENST00000384843 97 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 AL121972.1-201ENST00000402023 252 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 ZNF603P-201ENST00000405613 487 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 VN1R8P-201ENST00000407739 893 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 RPL37P18-201ENST00000411602 243 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 HMGN1P14-201ENST00000412459 517 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 MTND1P21-201ENST00000412991 285 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 AC009302.1-201ENST00000417147 390 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 EIF4HP2-201ENST00000424380 563 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX18Q96RF0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX18Q96RF0 AL353572.1-201ENST00000442490 417 ntBASIC4.41□□□□□ -1.7
SNX18Q96RF0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms