Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.26□□□□□ -1.73
USP47Q96K76 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 AC010468.1-201ENST00000461022 817 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.26□□□□□ -1.73
USP47Q96K76 AC068724.1-201ENST00000487100 792 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.26□□□□□ -1.73
USP47Q96K76 AC118465.1-201ENST00000513820 1271 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.26□□□□□ -1.73
USP47Q96K76 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP47Q96K76 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.26□□□□□ -1.73
USP47Q96K76 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.26□□□□□ -1.73
USP47Q96K76 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.26□□□□□ -1.73
USP47Q96K76 IGHV3-29-201ENST00000604817 344 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 AC110741.2-201ENST00000605278 268 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 AC139713.2-210ENST00000641741 992 ntBASIC4.26□□□□□ -1.73
USP47Q96K76 AC007342.7-201ENST00000624610 2337 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 BX005019.1-201ENST00000561881 1810 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.25□□□□□ -1.73
USP47Q96K76 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP47Q96K76 SNORA46-201ENST00000384762 135 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AC240504.1-201ENST00000395709 845 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AL512430.2-201ENST00000406786 339 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 CLIC4P1-201ENST00000453177 535 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.25□□□□□ -1.73
USP47Q96K76 RPS29P26-201ENST00000477483 171 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.25□□□□□ -1.73
USP47Q96K76 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.25□□□□□ -1.73
USP47Q96K76 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.25□□□□□ -1.73
USP47Q96K76 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.25□□□□□ -1.73
USP47Q96K76 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.25□□□□□ -1.73
USP47Q96K76 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.25□□□□□ -1.73
USP47Q96K76 AC007318.2-201ENST00000620999 243 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AC145207.9-201ENST00000623802 325 ntBASIC4.25□□□□□ -1.73
USP47Q96K76 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.25□□□□□ -1.73
USP47Q96K76 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP47Q96K76 AC009313.2-201ENST00000417893 1941 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP47Q96K76 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USP47Q96K76 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
USP47Q96K76 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP47Q96K76 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP47Q96K76 RNU1-87P-201ENST00000363727 170 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 AL603766.1-201ENST00000407763 664 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.24□□□□□ -1.73
USP47Q96K76 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP47Q96K76 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.24□□□□□ -1.73
USP47Q96K76 MTCYBP29-201ENST00000436327 1006 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.24□□□□□ -1.73
USP47Q96K76 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP47Q96K76 AC104629.2-201ENST00000468627 598 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.24□□□□□ -1.73
USP47Q96K76 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.24□□□□□ -1.73
USP47Q96K76 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.24□□□□□ -1.73
USP47Q96K76 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.24□□□□□ -1.73
USP47Q96K76 AC011492.1-201ENST00000600023 315 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 AC107294.1-201ENST00000609524 467 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 AL713922.2-201ENST00000619384 716 ntBASIC4.24□□□□□ -1.73
USP47Q96K76 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.24□□□□□ -1.73
USP47Q96K76 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USP47Q96K76 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.23□□□□□ -1.73
USP47Q96K76 AL592494.2-201ENST00000425455 1548 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP47Q96K76 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USP47Q96K76 RNU6-618P-201ENST00000363518 112 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 RNU6-670P-201ENST00000364312 104 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP47Q96K76 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
USP47Q96K76 MIR708-201ENST00000390708 88 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 HMGB3P23-201ENST00000414981 585 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.23□□□□□ -1.73
USP47Q96K76 AC125238.1-201ENST00000448842 249 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.23□□□□□ -1.73
USP47Q96K76 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.23□□□□□ -1.73
USP47Q96K76 RPL7P48-201ENST00000461513 746 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 AC021205.1-201ENST00000468797 348 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.23□□□□□ -1.73
USP47Q96K76 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.23□□□□□ -1.73
USP47Q96K76 AC117525.1-201ENST00000515228 503 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 AC009812.2-201ENST00000517657 457 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP47Q96K76 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.23□□□□□ -1.73
USP47Q96K76 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.23□□□□□ -1.73
USP47Q96K76 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.23□□□□□ -1.73
USP47Q96K76 AC010653.1-201ENST00000571108 881 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.23□□□□□ -1.73
USP47Q96K76 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.23□□□□□ -1.73
USP47Q96K76 MTCO1P24-201ENST00000515438 1558 ntBASIC4.23□□□□□ -1.73
USP47Q96K76 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP47Q96K76 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP47Q96K76 RN7SKP284-201ENST00000411002 343 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AC245054.2-201ENST00000415639 319 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.22□□□□□ -1.73
USP47Q96K76 AC099336.2-201ENST00000422457 254 ntBASIC4.22□□□□□ -1.73
USP47Q96K76 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.22□□□□□ -1.73
USP47Q96K76 AL139132.1-201ENST00000431587 344 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms