Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNA5SP88-201ENST00000365560 109 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RNA5SP151-201ENST00000365632 117 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF603P-201ENST00000405613 487 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RPL23AP39-201ENST00000415533 405 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 CYCSP10-201ENST00000417973 294 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RPS12P23-201ENST00000419579 400 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 BMS1P19-201ENST00000433925 393 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 RPS26P56-201ENST00000444468 240 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 TRGVB-201ENST00000453257 471 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 KATNBL1P6-201ENST00000453433 915 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 USP9YP10-201ENST00000454868 628 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 MTCO3P2-201ENST00000457365 171 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AP000893.1-201ENST00000474462 794 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AL024509.2-201ENST00000493462 493 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC008897.1-201ENST00000494006 347 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 USP9YP5-201ENST00000511770 630 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC026412.2-201ENST00000512270 1075 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 OR4A12P-201ENST00000530847 918 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 CYCSP2-201ENST00000558168 301 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AL596327.1-201ENST00000603629 213 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AC115621.1-201ENST00000604653 858 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 HULC.1-201ENST00000612720 240 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 AL356266.1-201ENST00000623311 483 ntBASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP3Q96JB5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL079343.1-201ENST00000572358 1771 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL592148.3-201ENST00000608771 2646 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL390237.1-201ENST00000404226 1415 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RNU1-20P-201ENST00000363314 162 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RPS3AP23-201ENST00000401762 784 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RPL23AP48-201ENST00000406913 488 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RPS20P14-201ENST00000412545 360 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 SNRPFP1-201ENST00000414761 252 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 Z99497.1-201ENST00000421282 135 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL953862.1-201ENST00000423016 168 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 CENPIP1-201ENST00000425713 902 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC096632.1-201ENST00000427395 310 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 CEACAMP9-201ENST00000442990 513 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RPL36AP33-201ENST00000450395 310 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 FGF7P3-201ENST00000454645 303 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC087879.1-201ENST00000474343 374 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 MTCYBP37-201ENST00000510642 1133 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC008802.1-201ENST00000519121 791 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AC103987.3-201ENST00000582071 292 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 KPNA2P3-201ENST00000584190 848 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SL52P-201ENST00000584271 284 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SKP299-201ENST00000606679 301 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AP002360.3-201ENST00000607673 710 ntBASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP3Q96JB5 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms