Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.9□□□□□ -1.31
LRCH3Q96II8 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.9□□□□□ -1.31
LRCH3Q96II8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
LRCH3Q96II8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.9□□□□□ -1.31
LRCH3Q96II8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
LRCH3Q96II8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
LRCH3Q96II8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL138713.1-201ENST00000624026 2130 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC112243.1-201ENST00000623949 3851 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 RNU1-150P-201ENST00000362491 162 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 RN7SKP125-201ENST00000410481 302 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 COX6CP10-201ENST00000416832 224 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL359092.1-201ENST00000417156 265 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL590233.1-201ENST00000430017 456 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL353597.2-202ENST00000434901 373 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 snoU13.8-201ENST00000458890 104 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 COPS8P2-201ENST00000473228 627 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC016559.2-201ENST00000510759 359 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC109446.1-201ENST00000566172 220 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 VN1R91P-201ENST00000594377 169 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL355877.2-201ENST00000603670 358 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AC034229.6-201ENST00000623704 224 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 AL353662.3-201ENST00000625131 237 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.89□□□□□ -1.31
LRCH3Q96II8 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LRCH3Q96II8 AP003175.1-201ENST00000641383 6658 ntBASIC6.89□□□□□ -1.31
LRCH3Q96II8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 RNU6-611P-201ENST00000384276 104 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 SNORA16.2-201ENST00000390991 127 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 SNORD70.1-201ENST00000391007 85 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL023807.1-201ENST00000407932 359 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL590762.4-201ENST00000425885 253 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL353997.1-201ENST00000432936 108 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 CBX1P4-201ENST00000439415 457 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 RAC1P7-201ENST00000445367 377 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL031274.1-201ENST00000450334 232 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 HMGB1P4-201ENST00000455362 567 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC087884.1-201ENST00000469738 328 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 OR51K1P-201ENST00000510214 950 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL049794.2-201ENST00000616301 365 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL365265.1-201ENST00000621045 234 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AL691477.1-201ENST00000624398 162 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 AC010401.2-201ENST00000575137 4934 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms