Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU6-584P-201ENST00000410350 95 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 RNU4-22P-201ENST00000411058 166 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 MFSD13B-201ENST00000420133 1290 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 MOB1AP1-201ENST00000430903 535 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 USP9YP31-201ENST00000431405 881 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL138799.3-201ENST00000438968 350 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 ZNF886P-201ENST00000450781 723 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 RFC5P1-201ENST00000454419 874 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 DUXAP8-207ENST00000456786 622 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 snoU13.3-201ENST00000459441 104 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL136126.1-201ENST00000473603 402 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC010301.1-201ENST00000473936 355 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 TMED11P-201ENST00000479478 690 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 RPS29P19-201ENST00000479709 171 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL049830.2-201ENST00000480072 201 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC092451.1-201ENST00000480211 153 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC134050.1-201ENST00000495088 933 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 MTCO3P44-201ENST00000510977 541 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 Y_RNA.717-201ENST00000517106 92 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 OR4R3P-201ENST00000525084 838 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 TRAV15-201ENST00000556680 249 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC007599.1-201ENST00000568688 1174 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 RN7SL339P-201ENST00000580597 296 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC015688.2-201ENST00000584523 262 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 MRPS35P3-201ENST00000603189 709 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC068313.1-201ENST00000604028 1008 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC113403.1-201ENST00000604910 193 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 DUXAP10-204ENST00000612052 616 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC008083.4-201ENST00000615076 444 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC073348.1-201ENST00000623002 331 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 AC008013.2-202ENST00000637965 364 ntBASIC3.64□□□□□ -1.83
RFT1Q96AA3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RFT1Q96AA3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFT1Q96AA3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 RNA5SP505-201ENST00000364748 108 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 RNU6-657P-201ENST00000383904 107 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 U1.1-201ENST00000384101 164 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 SNORA51.6-201ENST00000384151 125 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 PTMAP5-201ENST00000393073 333 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 RNA5SP36-201ENST00000410197 133 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 NRBF2P2-201ENST00000413087 861 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC009237.5-201ENST00000414271 501 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 SSR1P2-201ENST00000415208 787 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 MRPS36P1-201ENST00000421291 307 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 NANOGP5-201ENST00000424456 877 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AL009048.1-201ENST00000450437 298 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 RPS20P32-201ENST00000456044 356 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 RN7SL610P-201ENST00000463845 291 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC013828.1-201ENST00000481845 158 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC111000.3-201ENST00000508057 576 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.63□□□□□ -1.83
RFT1Q96AA3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFT1Q96AA3 MTND2P32-201ENST00000521584 1038 ntBASIC3.63□□□□□ -1.83
RFT1Q96AA3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms