Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 UBE2FP2-201ENST00000566646 462 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 MIR3934-201ENST00000579806 107 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 MIR4737-201ENST00000583979 81 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 SNORD39.3-201ENST00000584451 71 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 MIR548AB-201ENST00000584917 84 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC108747.1-201ENST00000609508 535 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AL357080.1-201ENST00000617394 239 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC006065.6-201ENST00000625201 545 ntBASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4AQ8WYN0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 Y_RNA.41-201ENST00000362646 102 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RNU6-1042P-201ENST00000384204 107 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RNU6-921P-201ENST00000384361 107 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 SNRPEP2-201ENST00000397592 279 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RN7SKP216-201ENST00000411050 312 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 FCF1P9-201ENST00000412546 282 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 HMGB1P11-201ENST00000413899 637 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AL139128.1-201ENST00000413921 941 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC104837.2-201ENST00000427236 424 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC010975.2-201ENST00000427781 588 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 OR2B8P-201ENST00000432841 938 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MTATP6P13-201ENST00000438531 667 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RPL39P6-201ENST00000448289 150 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC012671.1-201ENST00000451912 203 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RN7SL610P-201ENST00000463845 291 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC092757.1-201ENST00000467293 467 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC022795.1-201ENST00000473808 480 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RPL12P20-201ENST00000475538 479 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AP000797.1-201ENST00000478870 387 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC096751.1-202ENST00000502691 1067 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 BNIP3P41-201ENST00000503774 571 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC011352.1-201ENST00000512300 793 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC134698.5-201ENST00000519444 336 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AP003392.2-201ENST00000527269 208 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 OR4A45P-201ENST00000529954 901 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC074029.1-201ENST00000552531 1044 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC091489.2-201ENST00000566263 604 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MTND6P33-201ENST00000571794 183 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC091042.1-201ENST00000579213 173 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MIR4646-201ENST00000580775 63 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC104785.1-201ENST00000603220 588 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC123786.2-201ENST00000603459 275 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 RBM11P1-201ENST00000604951 799 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC138932.5-201ENST00000617759 563 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC068137.3-201ENST00000639191 341 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 AC073869.6-201ENST00000640656 341 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 TEX21P-201ENST00000447107 1476 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 XPOTP1-201ENST00000443317 2398 ntBASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4AQ8WYN0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RNA5SP307-201ENST00000362863 116 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RNU6-984P-201ENST00000363236 109 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms