Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC083799.1-201ENST00000366451 910 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 MIR3074-201ENST00000384885 81 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 MIR1261-201ENST00000408659 82 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC016687.1-201ENST00000482574 353 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 MTND3P6-201ENST00000485242 339 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC104446.1-201ENST00000613728 1321 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AL359693.1-201ENST00000614959 2407 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 RNU4-82P-201ENST00000362443 140 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC244453.4-201ENST00000419150 388 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC125238.1-201ENST00000448842 249 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 RPS17P11-201ENST00000474297 293 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AC020658.4-201ENST00000613987 684 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM3Q8TF72 CUL4AP1-201ENST00000514750 1863 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 SNORA70B-201ENST00000384210 135 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 RSL24D1P4-201ENST00000400938 484 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AL358913.1-201ENST00000554342 121 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AC007424.1-203ENST00000554613 687 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AL139286.1-201ENST00000604465 483 ntBASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM3Q8TF72 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 SNORA71.1-201ENST00000364523 117 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC240504.1-201ENST00000395709 845 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AL512430.2-201ENST00000406786 339 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC013268.2-201ENST00000420753 337 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 PRDX3P4-201ENST00000470828 747 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 CCNHP1-201ENST00000513311 678 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AL359535.1-201ENST00000612100 1087 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AP003485.2-201ENST00000623636 610 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 MTCO3P31-201ENST00000405526 789 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 RNA5SP107-201ENST00000411358 122 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC073136.2-201ENST00000417282 849 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 DUTP6-201ENST00000425573 462 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 HMGB1P18-201ENST00000438801 619 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 HMGB1P6-201ENST00000569046 646 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC067852.4-201ENST00000590314 478 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC124312.4-201ENST00000605533 310 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC139713.2-210ENST00000641741 992 ntBASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM3Q8TF72 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms