Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR10J6P-201ENST00000289731 930 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 U3.39-201ENST00000408569 239 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AL592310.1-201ENST00000414330 671 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 RPL21P109-201ENST00000422213 475 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 MTND4P24-201ENST00000424002 397 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 MOB1AP1-201ENST00000430903 535 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 RPL7P34-201ENST00000433316 712 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC092013.1-201ENST00000438795 332 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 EXOSC3P1-201ENST00000448649 500 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 SNORD11.1-201ENST00000459482 85 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC069499.1-201ENST00000489433 509 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 FTH1P9-201ENST00000513251 355 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNED1Q8TER0 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 DPRXP4-201ENST00000578053 568 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC090666.1-201ENST00000578241 445 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC245036.5-201ENST00000596330 847 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 ZNF92P3-201ENST00000596594 954 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 MTCO2P22-201ENST00000603246 681 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC069304.3-201ENST00000603938 1084 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC010680.3-201ENST00000604215 520 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 AL022161.1-201ENST00000604390 213 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC017104.5-201ENST00000637647 639 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 LINC02471-203ENST00000641941 4752 ntBASIC4.26□□□□□ -1.73
SNED1Q8TER0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SNED1Q8TER0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNED1Q8TER0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 BX119904.4-201ENST00000424402 301 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 TXNL1P1-201ENST00000429528 554 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 MTND2P5-201ENST00000432656 1006 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 RPS20P1-201ENST00000434853 354 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AF228730.2-201ENST00000438784 848 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 ELOCP10-201ENST00000440624 327 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC007000.2-201ENST00000442564 487 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 OR6K5P-201ENST00000447050 945 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC073587.1-201ENST00000447093 876 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC096576.1-201ENST00000489014 359 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC118465.1-201ENST00000513820 1271 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 RNU5A-7P-201ENST00000515979 116 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 MTCYBP19-201ENST00000517463 1124 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC010376.1-201ENST00000522101 334 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AP006245.1-201ENST00000522549 120 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 AL132857.1-201ENST00000555180 708 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AL133457.1-201ENST00000564251 987 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC145350.1-201ENST00000567426 208 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 ELOCP34-201ENST00000604436 327 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC078883.4-201ENST00000623218 367 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 AP002791.1-201ENST00000623291 381 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 AC009501.3-201ENST00000605001 1352 ntBASIC4.25□□□□□ -1.73
SNED1Q8TER0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.25□□□□□ -1.73
SNED1Q8TER0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNED1Q8TER0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL645937.1-201ENST00000641739 1652 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms