Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP366-201ENST00000365454 123 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MIR550A3-201ENST00000390735 95 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 EIF5P1-201ENST00000400019 1231 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPL23AP47-201ENST00000408017 460 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 TPT1P2-201ENST00000413105 503 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 BTF3P8-201ENST00000414577 526 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC009237.2-201ENST00000421358 284 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 SFR1P2-201ENST00000421841 730 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPL23AP38-201ENST00000423801 469 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC002075.2-201ENST00000425207 252 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC006989.1-201ENST00000427212 131 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MOB1AP1-201ENST00000430903 535 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MTCYBP15-201ENST00000433123 1127 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPL23AP33-201ENST00000442301 452 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 Z77249.1-201ENST00000444622 1175 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPS29P31-201ENST00000446147 164 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 NF1P3-201ENST00000457709 450 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 snoU109.3-201ENST00000459477 145 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RN7SL303P-201ENST00000469773 251 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPL32P9-201ENST00000487963 407 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC093267.1-201ENST00000489176 961 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 TPT1P8-201ENST00000510120 555 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP179-201ENST00000517284 121 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC093331.1-201ENST00000521474 169 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC087897.1-201ENST00000550134 156 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 KLKP1-201ENST00000595979 403 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 RPAP2P1-201ENST00000603626 1168 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AL354760.1-201ENST00000608357 643 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AL049539.1-201ENST00000611964 459 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AL592295.2-201ENST00000612578 206 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 ZNF542P-204ENST00000482727 1305 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 MTND5P28-201ENST00000438005 1594 ntBASIC3.17□□□□□ -1.9
CCDC71LQ8N9Z2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 ELL2P4-201ENST00000446870 1376 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 LARP1BP1-201ENST00000506036 1359 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP447-201ENST00000363749 119 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA58B-201ENST00000364259 136 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 SNORA7.2-201ENST00000364446 145 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RNU6-441P-201ENST00000384545 106 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 MIR937-201ENST00000401271 86 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 MTND4P22-201ENST00000413116 1169 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC008280.1-201ENST00000418851 412 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 CNOT7P1-201ENST00000429006 852 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL772161.1-201ENST00000439130 476 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 CBX1P1-201ENST00000440184 427 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RPS11P1-201ENST00000451072 473 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RPL12P26-201ENST00000452430 487 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC244505.3-201ENST00000454598 187 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms