Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AP000776.1-201ENST00000530032 1663 ntBASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.18□□□□□ -1.74
PCDH20Q8N6Y1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RNU5D-1-201ENST00000363299 116 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 SUGT1P1-201ENST00000379514 476 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RSL24D1P4-201ENST00000400938 484 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RNA5SP306-201ENST00000411087 107 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC233981.1-201ENST00000423224 461 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RPS6P12-201ENST00000432491 726 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 MTND3P1-201ENST00000441336 220 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RPS3AP22-201ENST00000488297 769 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RPL29P14-201ENST00000495837 428 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC010486.2-201ENST00000505572 483 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 KRT19P6-201ENST00000510983 209 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 RNU6-1129P-201ENST00000515964 104 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AP001189.2-201ENST00000527320 189 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC007834.2-201ENST00000536310 343 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 OSBPL9P5-201ENST00000542581 171 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC093519.1-201ENST00000566109 298 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 MIR5684-201ENST00000585074 65 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC009220.3-201ENST00000604318 586 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AL158042.1-201ENST00000605338 460 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC007390.2-201ENST00000606229 3803 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AC073348.1-201ENST00000623002 331 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 AL512506.2-201ENST00000624472 458 ntBASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH20Q8N6Y1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 Z73965.1-201ENST00000623412 2297 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RNU6-115P-201ENST00000364310 107 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RNA5SP515-201ENST00000364570 118 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 Y_RNA.408-201ENST00000383987 102 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 PPIAP31-201ENST00000405422 495 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RPL21P65-201ENST00000406094 466 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RPL23AP47-201ENST00000408017 460 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 MIR1193-201ENST00000408109 78 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RNU2-42P-201ENST00000410697 113 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 HSPE1P12-201ENST00000412576 301 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RAP1BP1-201ENST00000412709 553 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 FCF1P2-201ENST00000415284 583 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RAC1P3-201ENST00000416129 580 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 BOLA3P4-201ENST00000418151 400 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC009237.2-201ENST00000421358 284 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RWDD4P2-201ENST00000426392 563 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC010881.1-201ENST00000433830 235 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 ART2BP-201ENST00000453501 499 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC010307.1-201ENST00000467206 836 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RN7SL585P-201ENST00000470538 280 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 GAPDHP36-201ENST00000480688 918 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 RPL30P11-201ENST00000495304 339 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC104090.1-201ENST00000506341 1171 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 OR8R1P-201ENST00000543943 764 ntBASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDH20Q8N6Y1 AC079171.1-201ENST00000568788 914 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms