Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL121579.1-201ENST00000555129 305 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AL157786.1-207ENST00000627771 695 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC099654.14-201ENST00000638599 341 ntBASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A3Q8N4M1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 RNU1-94P-201ENST00000362627 173 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 Y_RNA.256-201ENST00000364594 104 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 SNORA62.2-201ENST00000364672 152 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL359837.1-201ENST00000381357 287 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-297P-201ENST00000384636 107 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 MIR659-201ENST00000384963 97 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 MIR181A1-201ENST00000385026 110 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL445189.1-201ENST00000405722 338 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 TMSB10P2-201ENST00000416049 131 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC245052.5-201ENST00000416320 649 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL389915.1-201ENST00000422463 466 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 ZNF863P-201ENST00000426746 417 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC011998.1-201ENST00000433403 117 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 OR4C10P-201ENST00000434991 931 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL022238.1-201ENST00000442557 355 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 SCARNA10-201ENST00000459255 330 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 KLF3P2-201ENST00000465138 268 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC021205.1-201ENST00000468797 348 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 FCF1P3-201ENST00000496394 590 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL035404.1-201ENST00000497982 568 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC108078.3-201ENST00000502633 489 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC105252.1-201ENST00000503089 286 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC098799.3-201ENST00000506095 438 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC048346.1-201ENST00000510247 144 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC091133.4-201ENST00000511142 308 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-885P-201ENST00000516607 104 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 DEFB108A-201ENST00000530110 222 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 POLR2KP1-201ENST00000553226 168 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AL390334.1-201ENST00000556395 450 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC136618.2-201ENST00000575091 400 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC233702.9-201ENST00000581528 203 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC005332.6-201ENST00000613178 446 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 AC034229.5-201ENST00000624258 185 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SLC44A3Q8N4M1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 RNU5F-6P-201ENST00000362979 116 ntBASIC4.76□□□□□ -1.65
SLC44A3Q8N4M1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms