Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 RN7SKP280-201ENST00000364196 304 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 RNU6-1151P-201ENST00000384684 107 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 SNORA57.1-201ENST00000391227 145 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 MCTS2P-201ENST00000394552 546 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 LIPT1P1-201ENST00000415870 1186 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC011242.1-201ENST00000433596 1158 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 SKP1P1-201ENST00000438081 489 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RAB11AP1-201ENST00000442978 646 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 RPS15AP1-201ENST00000457423 391 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 NAP1L1P3-201ENST00000462291 880 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RPL37P6-202ENST00000464216 403 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC078785.3-201ENST00000476607 425 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 TRBV12-2-201ENST00000489763 344 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 HMGB1P21-201ENST00000502313 581 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 PHBP14-201ENST00000512887 367 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 NPM1P41-201ENST00000512920 831 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RNA5SP208-201ENST00000516156 78 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RNA5SP164-201ENST00000516533 110 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 SUMO2P20-201ENST00000520803 283 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL139174.1-201ENST00000531489 886 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 HSPE1P5-201ENST00000561489 272 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL390816.3-201ENST00000604527 1066 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC002487.1-201ENST00000604565 994 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL137849.1-201ENST00000604767 169 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC079684.1-201ENST00000621405 437 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AL049777.1-201ENST00000622740 518 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC126544.2-201ENST00000625174 749 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 DCAF13P1-201ENST00000495256 1330 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 USP8P1-201ENST00000494673 3183 ntBASIC3.33□□□□□ -1.88
SKA3Q8IX90 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SKA3Q8IX90 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SKA3Q8IX90 AC026951.1-201ENST00000559530 2459 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKA3Q8IX90 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 DSTNP4-201ENST00000399472 474 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC096533.1-201ENST00000411645 353 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC098824.1-201ENST00000453565 980 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC006539.3-201ENST00000454258 129 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 snoU13.7-201ENST00000459220 104 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 SNRPGP3-201ENST00000469405 227 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 PRDX3P4-201ENST00000470828 747 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 UBE2CP3-201ENST00000502715 450 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC091860.1-201ENST00000505723 432 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC092747.2-201ENST00000545069 983 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 EIF5A2P1-201ENST00000564027 460 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC017100.2-201ENST00000584628 355 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC007687.1-201ENST00000602704 304 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC115621.1-201ENST00000604653 858 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 BRDTP1-201ENST00000605735 677 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AP003117.2-201ENST00000606010 545 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 SNORA62.6-201ENST00000606322 83 ntBASIC3.32□□□□□ -1.88
SKA3Q8IX90 AC011816.2-201ENST00000607089 556 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms