Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 MTCYBP43-201ENST00000513621 740 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC008694.2-201ENST00000517591 306 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 IGLV3-26-201ENST00000520756 302 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 MRPL49P2-201ENST00000521066 465 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 PHBP17-201ENST00000528576 541 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 ELOCP32-201ENST00000548625 324 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AL355836.1-201ENST00000555951 870 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AP001429.1-201ENST00000602568 530 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC091805.2-201ENST00000603848 235 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC128687.1-201ENST00000605304 619 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 MIR7151-201ENST00000617477 60 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC010338.1-201ENST00000621823 717 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC093875.1-201ENST00000623688 504 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 AC112487.2-201ENST00000637950 304 ntBASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BHLHA9Q7RTU4 MTND5P11-201ENST00000511037 1812 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 RNU4-73P-201ENST00000363164 141 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 SNORA27.3-201ENST00000364937 134 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 RNU6-207P-201ENST00000384137 107 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC007899.1-201ENST00000412776 775 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 EIF1P3-201ENST00000423841 334 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 COX6CP15-201ENST00000426313 211 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 ISCA1P1-201ENST00000426679 387 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 COX6B1P7-201ENST00000430845 235 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 HMGB3P10-201ENST00000434734 572 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 MTND2P29-201ENST00000438595 412 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 SUMO1P2-201ENST00000452524 304 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 NUTF2P7-201ENST00000453086 375 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 CFTRP1-201ENST00000456646 183 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 RPS20P4-201ENST00000461659 355 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC026427.2-201ENST00000506228 536 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC005178.1-201ENST00000508392 440 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 PARP4P3-201ENST00000510265 317 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC021146.3-201ENST00000511911 260 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 TVP23BP1-201ENST00000557500 617 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC024060.1-201ENST00000607052 494 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AL606537.1-201ENST00000607258 2011 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC027807.2-201ENST00000616099 408 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AC006840.1-201ENST00000623069 542 ntBASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
BHLHA9Q7RTU4 AP001350.1-201ENST00000601906 1524 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 MTND4P14-201ENST00000435799 1354 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RLIMP2-201ENST00000427891 1563 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL356317.1-201ENST00000396110 1436 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 DDX6P1-205ENST00000441966 1436 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms