Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 RPL7P26-201ENST00000333817 754 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 MIR30E-201ENST00000362104 92 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AL513477.1-202ENST00000417061 214 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 MTCO1P52-201ENST00000433928 531 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC008565.1-201ENST00000509046 885 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC083843.2-201ENST00000568248 6253 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 RNA5SP502-201ENST00000362694 119 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 SNORD56.3-201ENST00000363507 71 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 GCNT6-201ENST00000379591 934 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 MIR518C-201ENST00000384822 101 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 RPL32P35-201ENST00000415214 394 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 RNA5SP148-201ENST00000516527 94 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 AP000873.5-201ENST00000533906 236 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 AC010620.2-201ENST00000600135 313 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 AL008729.2-201ENST00000606393 473 ntBASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
VPS13DQ5THJ4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 SRIP2-201ENST00000428470 166 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC114781.4-201ENST00000513707 639 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 COX6CP8-201ENST00000522620 226 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC026790.2-201ENST00000606282 430 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC105918.1-201ENST00000474399 838 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC118282.1-201ENST00000506408 765 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC119751.1-201ENST00000513357 765 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC019227.1-201ENST00000526902 510 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AL451049.1-201ENST00000608672 497 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 AC103858.2-201ENST00000621471 543 ntBASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.9□□□□□ -2.11
VPS13DQ5THJ4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 RNA5SP289-201ENST00000362332 137 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 MIR196B-201ENST00000384852 84 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 SEPT7P2-202ENST00000398921 823 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AL139415.2-201ENST00000431968 163 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 ISCA1P2-201ENST00000438679 421 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 ANXA2P1-201ENST00000505539 926 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AL359535.1-201ENST00000612100 1087 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC012020.1-201ENST00000624541 1728 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 MTCO1P9-201ENST00000505577 1534 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC005189.1-201ENST00000431286 310 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 ZNF658B-202ENST00000615961 3375 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 RNA5SP296-201ENST00000410523 111 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 RNU7-170P-201ENST00000459303 61 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 RN7SL330P-201ENST00000469709 307 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.89□□□□□ -2.11
VPS13DQ5THJ4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms