Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AL353597.2-202ENST00000434901 373 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.02□□□□□ -1.61
USP39Q53GS9 TCEA1P1-201ENST00000449716 880 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 DNAJC19P8-201ENST00000452887 259 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AL354710.1-201ENST00000453641 246 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 SNX5P1-201ENST00000505757 1041 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AC108078.1-201ENST00000508073 725 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 ENPP7P9-201ENST00000514456 627 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 RN7SKP276-201ENST00000516242 268 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.02□□□□□ -1.61
USP39Q53GS9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.02□□□□□ -1.61
USP39Q53GS9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.02□□□□□ -1.61
USP39Q53GS9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.02□□□□□ -1.61
USP39Q53GS9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.02□□□□□ -1.61
USP39Q53GS9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.02□□□□□ -1.61
USP39Q53GS9 AC006349.1-201ENST00000555526 235 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 GTF2IP8-201ENST00000560687 584 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 TVP23CP2-201ENST00000571473 623 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 AC020910.3-201ENST00000603701 874 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 AC131902.3-201ENST00000611767 581 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AL592295.2-201ENST00000612578 206 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 AL359880.1-201ENST00000621879 266 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
USP39Q53GS9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP39Q53GS9 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
USP39Q53GS9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.02□□□□□ -1.61
USP39Q53GS9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USP39Q53GS9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 Y_RNA.160-201ENST00000363677 92 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 RNA5SP332-201ENST00000391063 115 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.01□□□□□ -1.61
USP39Q53GS9 RN7SKP285-201ENST00000410137 318 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 RN7SKP16-201ENST00000410180 299 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AL389915.1-201ENST00000422463 466 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 ELOCP14-201ENST00000428070 331 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AP001324.1-201ENST00000428553 399 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 ZYG11AP1-201ENST00000430329 837 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC093716.1-201ENST00000435923 377 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC104850.1-201ENST00000435940 476 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 ELOCP7-201ENST00000439968 331 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 PDSS1P2-201ENST00000449397 678 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 BX322784.1-201ENST00000455793 1077 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 RPS29P25-201ENST00000481709 171 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC111000.3-201ENST00000508057 576 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.01□□□□□ -1.61
USP39Q53GS9 IGHV3-63-201ENST00000518422 341 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 IGJP1-201ENST00000522682 475 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC009643.1-201ENST00000532030 391 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AP001880.2-201ENST00000538233 448 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC025260.1-201ENST00000548858 430 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC009852.2-201ENST00000567898 485 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 MIR4637-201ENST00000582405 84 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AL390838.2-201ENST00000602394 274 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC010680.3-201ENST00000604215 520 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 AL020991.1-201ENST00000612314 373 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC027807.2-201ENST00000616099 408 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC136475.10-201ENST00000620253 385 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 AC138965.3-201ENST00000623875 498 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AC112487.2-201ENST00000637950 304 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 PHKBP1-201ENST00000450951 1951 ntBASIC5.01□□□□□ -1.61
USP39Q53GS9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.01□□□□□ -1.61
USP39Q53GS9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USP39Q53GS9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.01□□□□□ -1.61
USP39Q53GS9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
USP39Q53GS9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms