Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 RAB28P1-201ENST00000411517 641 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 UBE2V1P11-201ENST00000411559 285 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC245054.1-201ENST00000420944 258 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 MTCO1P43-201ENST00000431831 488 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC007967.1-201ENST00000455422 1159 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 RPL32P14-201ENST00000463196 378 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AL139099.1-201ENST00000497398 403 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX4Q33E94 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 RN7SKP283-201ENST00000517197 270 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 COX6B1P6-201ENST00000522347 255 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 MED28P5-201ENST00000528254 438 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC027104.1-201ENST00000563702 681 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC007224.1-201ENST00000564410 144 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.26□□□□□ -1.89
RFX4Q33E94 MIR4286-201ENST00000580651 93 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC026741.1-201ENST00000605892 482 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC022079.2-201ENST00000619739 566 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC024595.1-201ENST00000623088 387 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RFX4Q33E94 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 AC022031.1-201ENST00000585985 2593 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFX4Q33E94 AL049737.1-201ENST00000413920 1403 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 MTCO1P4-201ENST00000520516 1409 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX4Q33E94 MTND5P3-201ENST00000438536 1800 ntBASIC3.26□□□□□ -1.89
RFX4Q33E94 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.26□□□□□ -1.89
RFX4Q33E94 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 RNA5SP391-201ENST00000363456 119 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RFX4Q33E94 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 RNU2-65P-201ENST00000410162 185 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC092745.2-202ENST00000411880 369 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 BX664727.1-201ENST00000416024 466 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AL139247.1-201ENST00000422768 325 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX4Q33E94 MRPL35P4-201ENST00000453682 566 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC096992.1-201ENST00000459808 709 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 SETP6-201ENST00000479329 568 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC073522.1-201ENST00000483312 377 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 VN1R105P-201ENST00000486595 910 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 MTCO2P9-201ENST00000503214 694 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX4Q33E94 RNU6-334P-201ENST00000517072 102 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX4Q33E94 IGHV3-76-201ENST00000522465 295 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 C1DP5-201ENST00000525775 383 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC113192.3-201ENST00000529152 742 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 OR8R1P-201ENST00000543943 764 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX4Q33E94 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC053481.4-201ENST00000583164 216 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC018754.1-201ENST00000607486 925 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 AC096586.1-201ENST00000610267 561 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 MIR8058-201ENST00000615737 89 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX4Q33E94 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
RFX4Q33E94 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX4Q33E94 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX4Q33E94 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX4Q33E94 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX4Q33E94 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX4Q33E94 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX4Q33E94 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms