Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC068533.1-201ENST00000418542 415 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 RPL36AP36-201ENST00000418616 301 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC027644.1-201ENST00000419595 298 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC010655.1-201ENST00000449336 292 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC091959.2-201ENST00000477363 321 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 VN1R105P-201ENST00000486595 910 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC020893.1-201ENST00000502452 580 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX1Q15475 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX1Q15475 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 COX6B1P6-201ENST00000522347 255 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 IGJP1-201ENST00000522682 475 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX1Q15475 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC053481.4-201ENST00000583164 216 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 NTAN1P1-201ENST00000603150 646 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC110741.2-201ENST00000605278 268 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC106052.1-201ENST00000608029 497 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 AC123767.1-202ENST00000620407 817 ntBASIC3.69□□□□□ -1.82
SIX1Q15475 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX1Q15475 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX1Q15475 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SIX1Q15475 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SIX1Q15475 ASNSP1-204ENST00000641977 1664 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SIX1Q15475 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 AP004289.2-201ENST00000444413 1457 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 U8.11-201ENST00000384699 133 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 U8.12-201ENST00000384701 133 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 Y_RNA.578-201ENST00000390903 88 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AL590704.1-201ENST00000402856 794 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SIX1Q15475 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX1Q15475 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 MTND2P5-201ENST00000432656 1006 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC092013.1-201ENST00000438795 332 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 MTCYBP42-201ENST00000444653 1130 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 OFD1P3Y-201ENST00000453312 783 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 BX248409.1-201ENST00000455497 255 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 U8.18-201ENST00000459285 133 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC073522.1-201ENST00000483312 377 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC079203.1-201ENST00000487972 404 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC008562.1-201ENST00000521763 330 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 MTCO1P49-201ENST00000523429 802 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC090819.1-201ENST00000523800 1111 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AP001636.2-201ENST00000525517 696 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 AP000926.4-201ENST00000527351 454 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX1Q15475 AGGF1P5-201ENST00000567900 919 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC115085.1-201ENST00000588924 229 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 AC013244.3-201ENST00000605614 388 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC063944.3-201ENST00000609969 533 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 VN1R74P-201ENST00000613259 503 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 VN1R7P-201ENST00000619242 903 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC112200.1-201ENST00000625015 234 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC119674.1-207ENST00000641355 633 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SIX1Q15475 AC046144.1-201ENST00000478559 1853 ntBASIC3.68□□□□□ -1.82
SIX1Q15475 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX1Q15475 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX1Q15475 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX1Q15475 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX1Q15475 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX1Q15475 AC022031.1-201ENST00000585985 2593 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 AL445437.1-201ENST00000623157 3087 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX1Q15475 AC138393.1-206ENST00000540997 1886 ntBASIC3.67□□□□□ -1.82
SIX1Q15475 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SIX1Q15475 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SIX1Q15475 RNU4-51P-201ENST00000364206 140 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms