Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1SQ13698 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.68□□□□□ -1.82
CACNA1SQ13698 MIR4769-201ENST00000584126 77 ntBASIC3.68□□□□□ -1.82
CACNA1SQ13698 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1SQ13698 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CACNA1SQ13698 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1SQ13698 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1SQ13698 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1SQ13698 AL365361.1-201ENST00000566942 3481 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 AL162388.1-201ENST00000450912 352 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC243772.1-201ENST00000451620 410 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 FABP5P12-201ENST00000515543 389 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC105036.1-201ENST00000566222 271 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC091903.1-201ENST00000624322 454 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1SQ13698 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC108206.1-201ENST00000570186 4159 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC012020.1-201ENST00000624541 1728 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CACNA1SQ13698 MIR1261-201ENST00000408659 82 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AL353597.2-202ENST00000434901 373 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 UBE2V2P4-201ENST00000447495 259 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 METTL15P1-201ENST00000481421 1045 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.67□□□□□ -1.82
CACNA1SQ13698 OR5G4P-201ENST00000525251 760 ntBASIC3.67□□□□□ -1.82
CACNA1SQ13698 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 ELL2P4-201ENST00000446870 1376 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 RSL24D1P4-201ENST00000400938 484 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 RAC1P3-201ENST00000416129 580 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 Z93242.1-201ENST00000427102 353 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 MYL8P-204ENST00000431574 518 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 Y_RNA.638-201ENST00000459374 113 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1SQ13698 AP002812.4-201ENST00000532139 286 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 AL590808.1-201ENST00000618696 141 ntBASIC3.66□□□□□ -1.82
CACNA1SQ13698 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1SQ13698 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 MTND5P24-201ENST00000438892 1767 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1SQ13698 RN7SKP44-201ENST00000363602 316 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1SQ13698 GTF2IP23-201ENST00000423746 351 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 TRBV12-1-201ENST00000479785 344 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 SRIP1-201ENST00000489235 288 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.65□□□□□ -1.82
CACNA1SQ13698 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1SQ13698 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1SQ13698 AL096803.3-201ENST00000609032 532 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 OR6R2P-201ENST00000609216 300 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 AC096586.2-201ENST00000610260 441 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 TUG1_1.1-201ENST00000610654 145 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.82
CACNA1SQ13698 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CACNA1SQ13698 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CACNA1SQ13698 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CACNA1SQ13698 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CACNA1SQ13698 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.83
CACNA1SQ13698 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.83
CACNA1SQ13698 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.65□□□□□ -1.83
CACNA1SQ13698 RNU1-75P-201ENST00000347264 129 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 RPL5P19-201ENST00000404228 893 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 NPM1P24-201ENST00000428039 894 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC114781.4-201ENST00000513707 639 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC090281.1-201ENST00000523019 276 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL157394.1-201ENST00000562983 1224 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC243829.7-201ENST00000633081 225 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AL049555.1-201ENST00000562834 1933 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1SQ13698 PNPT1P2-201ENST00000456768 2050 ntBASIC3.64□□□□□ -1.83
CACNA1SQ13698 AC093311.1-201ENST00000506586 2021 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms