Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RN7SL860P-201ENST00000473738 223 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXC1Q12948 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXC1Q12948 SCARNA24.2-201ENST00000516968 130 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXC1Q12948 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC233702.7-202ENST00000582941 211 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.15□□□□□ -1.42
FOXC1Q12948 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXC1Q12948 AC006363.1-201ENST00000603806 463 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 AC111186.1-201ENST00000604684 130 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 ELOCP5-201ENST00000604924 333 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 AC007619.2-201ENST00000605743 379 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 MIR376A1-201ENST00000616574 68 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 AC000123.2-201ENST00000623124 461 ntBASIC6.15□□□□□ -1.42
FOXC1Q12948 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.15□□□□□ -1.42
FOXC1Q12948 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXC1Q12948 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
FOXC1Q12948 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.15□□□□□ -1.43
FOXC1Q12948 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
FOXC1Q12948 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
FOXC1Q12948 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
FOXC1Q12948 AC009643.2-201ENST00000603543 1448 ntBASIC6.15□□□□□ -1.43
FOXC1Q12948 AC010886.1-201ENST00000437380 2869 ntBASIC6.15□□□□□ -1.43
FOXC1Q12948 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXC1Q12948 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
FOXC1Q12948 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC023421.1-201ENST00000590535 1785 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 Y_RNA.233-201ENST00000364407 101 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 RNU6-1303P-201ENST00000364841 107 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 RN7SKP62-201ENST00000384539 329 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 MIR628-201ENST00000385229 95 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC093106.2-201ENST00000428212 385 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 AC093414.1-201ENST00000434712 514 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 TPT1P13-201ENST00000449760 499 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 CFL1P4-201ENST00000451536 498 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 RN7SL369P-201ENST00000477138 299 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AL139099.1-201ENST00000497398 403 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 AC074133.1-201ENST00000515696 183 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 RNA5SP34-201ENST00000516887 130 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 RNU6-64P-201ENST00000517119 105 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXC1Q12948 AC068768.2-201ENST00000602352 343 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 MIR4679-1-201ENST00000637619 75 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
FOXC1Q12948 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXC1Q12948 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXC1Q12948 RLIMP1-201ENST00000339626 1680 ntBASIC6.14□□□□□ -1.43
FOXC1Q12948 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
FOXC1Q12948 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXC1Q12948 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms