Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.06□□□□□ -1.76
GABPAQ06546 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC104072.1-201ENST00000568817 668 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 MIR4512-201ENST00000583257 77 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC069304.3-201ENST00000603938 1084 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 MIR7112-201ENST00000616126 65 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC091953.5-201ENST00000622919 233 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC067852.7-201ENST00000623270 535 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
GABPAQ06546 AC106858.1-201ENST00000637497 429 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 AC017104.5-201ENST00000637647 639 ntBASIC4.06□□□□□ -1.76
GABPAQ06546 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GABPAQ06546 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.05□□□□□ -1.76
GABPAQ06546 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.05□□□□□ -1.76
GABPAQ06546 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.05□□□□□ -1.76
GABPAQ06546 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC246680.2-201ENST00000422106 389 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 AL138785.1-201ENST00000425821 331 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC115115.1-201ENST00000449927 248 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 GTF2IP12-201ENST00000456547 356 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 BTF3P5-201ENST00000457252 467 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 RPS17P11-201ENST00000474297 293 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.05□□□□□ -1.76
GABPAQ06546 PRELID3BP7-201ENST00000503606 469 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC005798.1-201ENST00000513715 387 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 AC112198.4-201ENST00000515450 351 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 SNORA70.24-201ENST00000517233 118 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC068339.2-201ENST00000534395 618 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 AC011611.1-201ENST00000552179 197 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 AC090312.2-201ENST00000582687 378 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC008759.3-201ENST00000613300 508 ntBASIC4.05□□□□□ -1.76
GABPAQ06546 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
GABPAQ06546 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GABPAQ06546 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GABPAQ06546 AL049737.1-201ENST00000413920 1403 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.04□□□□□ -1.76
GABPAQ06546 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
GABPAQ06546 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
GABPAQ06546 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GABPAQ06546 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
GABPAQ06546 RNU6-1279P-201ENST00000383917 103 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 U6.112-201ENST00000384129 70 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 SNORD65C-201ENST00000390962 71 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 DNAJC19P6-201ENST00000401853 280 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AL391417.1-201ENST00000404100 426 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.04□□□□□ -1.76
GABPAQ06546 MRPS18BP2-201ENST00000434310 759 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.04□□□□□ -1.76
GABPAQ06546 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.04□□□□□ -1.76
GABPAQ06546 RPS26P30-201ENST00000443431 335 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AC005002.1-201ENST00000447458 540 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 MRPL35P4-201ENST00000453682 566 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 RPL32P34-201ENST00000486380 400 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 DSTNP2-201ENST00000504533 515 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.04□□□□□ -1.76
GABPAQ06546 HMGB1P1-201ENST00000522557 636 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 OR5AP1P-201ENST00000529730 940 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.04□□□□□ -1.76
GABPAQ06546 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.04□□□□□ -1.76
GABPAQ06546 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.04□□□□□ -1.76
GABPAQ06546 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.04□□□□□ -1.76
GABPAQ06546 AL442163.2-201ENST00000553912 710 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AC005476.1-201ENST00000554427 397 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 MIR4789-201ENST00000577469 82 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AC093875.1-201ENST00000623688 504 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 OR6C71P-202ENST00000641886 1107 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 AL592437.2-201ENST00000421655 2434 ntBASIC4.04□□□□□ -1.76
GABPAQ06546 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GABPAQ06546 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GABPAQ06546 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.76
GABPAQ06546 AL035405.1-201ENST00000400795 710 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AL355615.1-201ENST00000406187 641 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 SNORA11C-201ENST00000408532 129 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms