Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
H3F3AP84243 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.95□□□□□ -1.94
H3F3AP84243 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
H3F3AP84243 RNU1-70P-201ENST00000362618 164 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AP002088.1-201ENST00000382740 395 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 RNA5SP107-201ENST00000411358 122 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC245291.1-201ENST00000419501 328 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 OR1AA1P-201ENST00000419597 916 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.95□□□□□ -1.94
H3F3AP84243 YME1L1P1-201ENST00000429435 297 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.95□□□□□ -1.94
H3F3AP84243 B3GNT2P1-201ENST00000434960 952 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 FTH1P1-201ENST00000437933 532 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC006994.1-201ENST00000438212 839 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 RPL29P29-201ENST00000448725 423 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 RPL21P10-201ENST00000463521 490 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC091153.1-201ENST00000466297 402 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
H3F3AP84243 AC073522.1-201ENST00000483312 377 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.95□□□□□ -1.94
H3F3AP84243 FABP5P12-201ENST00000515543 389 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.95□□□□□ -1.94
H3F3AP84243 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
H3F3AP84243 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.95□□□□□ -1.94
H3F3AP84243 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC011611.1-201ENST00000552179 197 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.95□□□□□ -1.94
H3F3AP84243 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC010735.1-201ENST00000567305 1026 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.95□□□□□ -1.94
H3F3AP84243 ELOCP35-201ENST00000604289 336 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC009948.4-201ENST00000604692 675 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC073657.2-201ENST00000605661 303 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 HMGN2P28-201ENST00000606102 262 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
H3F3AP84243 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.95□□□□□ -1.94
H3F3AP84243 AC073476.4-201ENST00000628409 72 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.95□□□□□ -1.94
H3F3AP84243 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
H3F3AP84243 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
H3F3AP84243 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 AC087565.3-202ENST00000642085 1603 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
H3F3AP84243 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3F3AP84243 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
H3F3AP84243 MIR23B-201ENST00000384832 97 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 MIR607-201ENST00000385241 96 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
H3F3AP84243 RNA5SP229-201ENST00000410809 99 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.94□□□□□ -1.94
H3F3AP84243 RPL23AP22-201ENST00000437556 453 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3F3AP84243 AL157827.1-201ENST00000447622 132 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 RPS4XP13-201ENST00000483219 789 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 RPL7P38-201ENST00000488396 739 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.94□□□□□ -1.94
H3F3AP84243 KCTD9P5-201ENST00000504141 1170 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.94□□□□□ -1.94
H3F3AP84243 AC114967.1-201ENST00000504890 259 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC021678.1-201ENST00000505195 936 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 CCNHP1-201ENST00000513311 678 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 RN7SKP244-201ENST00000516513 307 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC068657.1-201ENST00000520807 306 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.94□□□□□ -1.94
H3F3AP84243 OR8L1P-201ENST00000534005 955 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 RPL21P12-201ENST00000559810 515 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 AC005412.1-201ENST00000580812 1049 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.94□□□□□ -1.94
H3F3AP84243 MIR548Y-201ENST00000582739 110 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC010615.3-201ENST00000597319 394 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 CKS1BP3-201ENST00000600888 237 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.94□□□□□ -1.94
H3F3AP84243 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.94□□□□□ -1.94
H3F3AP84243 AC005021.1-201ENST00000608730 355 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC090425.2-201ENST00000608818 501 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AL392048.1-201ENST00000613946 534 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AP005212.4-201ENST00000614206 710 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3F3AP84243 AC245389.2-201ENST00000616023 576 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC243756.2-201ENST00000618406 463 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC242843.1-201ENST00000618702 573 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.94□□□□□ -1.94
H3F3AP84243 AC007496.3-201ENST00000624987 3443 ntBASIC2.94□□□□□ -1.94
H3F3AP84243 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms