Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC098824.1-201ENST00000453565 980 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX6-1P78426 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC079168.1-201ENST00000458741 345 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC092324.1-201ENST00000468671 324 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RN7SL481P-201ENST00000477764 299 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RPL9P33-201ENST00000484311 566 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RN7SL346P-201ENST00000491561 294 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AL358832.1-201ENST00000497800 389 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 COX7A2P2-201ENST00000505291 250 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RPS4XP20-201ENST00000505751 772 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 RPL37P25-201ENST00000507308 276 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 PGBD4P4-201ENST00000509673 613 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AP003467.2-201ENST00000520175 319 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 SETP2-201ENST00000553886 926 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC027807.1-201ENST00000559921 996 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC233702.9-201ENST00000581528 203 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC011447.4-201ENST00000587562 111 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC011487.3-201ENST00000593607 453 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC107304.1-201ENST00000604229 296 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC090578.1-201ENST00000604955 591 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC087783.2-201ENST00000605070 562 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC108747.1-201ENST00000609508 535 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 MIR378J-201ENST00000611988 109 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 uc_338.18-201ENST00000615451 175 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC091905.4-201ENST00000623432 202 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
NKX6-1P78426 AC099654.12-201ENST00000639868 649 ntBASIC4.58□□□□□ -1.68
NKX6-1P78426 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NKX6-1P78426 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NKX6-1P78426 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AL139811.1-201ENST00000424779 2299 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC092125.1-201ENST00000562568 1995 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 FRG1BP-201ENST00000278882 761 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 Y_RNA.234-201ENST00000364409 97 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NKX6-1P78426 RNU6-1207P-201ENST00000384343 107 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 RNU6-517P-201ENST00000384362 110 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 MIR153-1-201ENST00000384914 90 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 HSPA8P15-201ENST00000401676 786 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 RPS20P2-201ENST00000402520 389 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AL049693.1-201ENST00000402760 611 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AL359704.1-201ENST00000411586 781 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC004690.1-201ENST00000418216 328 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 RPS12P5-201ENST00000423449 371 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC104651.1-201ENST00000427559 735 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX6-1P78426 USP9YP9-201ENST00000429406 715 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 RPEP2-201ENST00000432149 701 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AL031667.1-201ENST00000440222 725 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX6-1P78426 RPS29P33-201ENST00000456717 146 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC011005.3-201ENST00000491624 395 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.57□□□□□ -1.68
NKX6-1P78426 SNORA18.6-201ENST00000516792 115 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 RN7SKP116-201ENST00000516902 319 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 AC024940.3-201ENST00000538551 316 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.57□□□□□ -1.68
NKX6-1P78426 MIR7853-201ENST00000584820 132 ntBASIC4.57□□□□□ -1.68
NKX6-1P78426 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms