Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC093824.1-201ENST00000508796 343 ntBASIC1.93□□□□□ -2.1
RPS28P62857 RPL7L1P7-201ENST00000509986 724 ntBASIC1.93□□□□□ -2.1
RPS28P62857 FABP5P6-201ENST00000510588 409 ntBASIC1.93□□□□□ -2.1
RPS28P62857 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 IGKV2-18-201ENST00000522607 343 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC010306.1-201ENST00000523223 1117 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 NDUFS5P6-201ENST00000529136 295 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.93□□□□□ -2.1
RPS28P62857 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.93□□□□□ -2.1
RPS28P62857 AC051619.2-201ENST00000559063 397 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC090888.1-201ENST00000561335 1141 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 AC079880.2-201ENST00000603790 1213 ntBASIC1.93□□□□□ -2.1
RPS28P62857 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC1.93□□□□□ -2.1
RPS28P62857 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC1.93□□□□□ -2.1
RPS28P62857 AC009283.1-201ENST00000615852 645 ntBASIC1.93□□□□□ -2.1
RPS28P62857 MTND2P41-201ENST00000637599 773 ntBASIC1.93□□□□□ -2.1
RPS28P62857 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPS28P62857 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.93□□□□□ -2.1
RPS28P62857 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPS28P62857 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.92□□□□□ -2.1
RPS28P62857 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPS28P62857 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPS28P62857 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RPS28P62857 RN7SKP149-201ENST00000363008 344 ntBASIC1.92□□□□□ -2.1
RPS28P62857 RNA5SP510-201ENST00000364697 99 ntBASIC1.92□□□□□ -2.1
RPS28P62857 SNORD3H-201ENST00000384486 214 ntBASIC1.92□□□□□ -2.1
RPS28P62857 MIR128-2-201ENST00000384893 84 ntBASIC1.92□□□□□ -2.1
RPS28P62857 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL451074.5-201ENST00000415894 435 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 ARL2BPP3-201ENST00000421226 480 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AC009414.1-201ENST00000427200 443 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 AC016831.4-201ENST00000438302 307 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AC234781.3-201ENST00000452540 973 ntBASIC1.92□□□□□ -2.1
RPS28P62857 CEACAMP11-201ENST00000455211 583 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC007967.1-201ENST00000455422 1159 ntBASIC1.92□□□□□ -2.1
RPS28P62857 HMGN1P8-201ENST00000463578 288 ntBASIC1.92□□□□□ -2.1
RPS28P62857 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 AC025518.1-201ENST00000479856 347 ntBASIC1.92□□□□□ -2.1
RPS28P62857 RN7SL319P-201ENST00000480656 221 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 RN7SL184P-201ENST00000488308 297 ntBASIC1.92□□□□□ -2.1
RPS28P62857 RN7SL608P-201ENST00000492377 279 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 AC008885.2-201ENST00000509506 930 ntBASIC1.92□□□□□ -2.1
RPS28P62857 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPS28P62857 KRT19P6-201ENST00000510983 209 ntBASIC1.92□□□□□ -2.1
RPS28P62857 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.92□□□□□ -2.1
RPS28P62857 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AP000889.2-201ENST00000532684 490 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.92□□□□□ -2.1
RPS28P62857 AC009127.3-201ENST00000570531 403 ntBASIC1.92□□□□□ -2.1
RPS28P62857 RPS3AP23-202ENST00000574601 686 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AP005901.4-201ENST00000577336 569 ntBASIC1.92□□□□□ -2.1
RPS28P62857 MIR5004-201ENST00000579078 107 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL590392.1-201ENST00000604960 446 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AL390877.1-201ENST00000605704 214 ntBASIC1.92□□□□□ -2.1
RPS28P62857 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC090116.1-201ENST00000615679 446 ntBASIC1.92□□□□□ -2.1
RPS28P62857 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.92□□□□□ -2.1
RPS28P62857 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC1.92□□□□□ -2.1
RPS28P62857 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.92□□□□□ -2.1
RPS28P62857 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPS28P62857 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 OR13C1P-202ENST00000641378 2919 ntBASIC1.91□□□□□ -2.1
RPS28P62857 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.91□□□□□ -2.1
RPS28P62857 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPS28P62857 AL645927.1-201ENST00000396783 406 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AL513475.1-201ENST00000406602 315 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AL513331.1-201ENST00000411908 397 ntBASIC1.91□□□□□ -2.1
RPS28P62857 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC1.91□□□□□ -2.1
RPS28P62857 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC1.91□□□□□ -2.1
RPS28P62857 NDUFB4P6-201ENST00000436819 366 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms