Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLRN1P58418 ELL2P4-201ENST00000446870 1376 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CLRN1P58418 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 ADAM5-202ENST00000399789 1942 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 AL161781.1-201ENST00000354277 403 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RNA5SP183-201ENST00000362452 119 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RNU6-1085P-201ENST00000363576 107 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RNU6-282P-201ENST00000365357 103 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RNU6-483P-201ENST00000384088 108 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLRN1P58418 RPL31P1-201ENST00000398116 372 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 SSXP10-201ENST00000402595 565 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 MRPL42P2-201ENST00000403169 426 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 RNA5SP296-201ENST00000410523 111 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RN7SKP206-201ENST00000410823 293 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RN7SKP126-201ENST00000411143 300 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC127391.1-201ENST00000411737 98 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AL353777.1-201ENST00000425552 326 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 COX6CP13-201ENST00000428703 226 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 MTND1P12-201ENST00000455231 147 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC009127.1-201ENST00000467090 155 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC093267.1-201ENST00000489176 961 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RPL35P6-201ENST00000490024 372 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC093767.1-201ENST00000504523 156 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 PGAM1P13-201ENST00000507497 754 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC011411.1-201ENST00000509592 876 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 ATP5LP3-201ENST00000514223 304 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 RNU6-507P-201ENST00000516045 100 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 RNU6-358P-201ENST00000516564 75 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 Y_RNA.693-201ENST00000516641 110 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 MTND1P35-201ENST00000526739 508 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC123904.2-201ENST00000548059 300 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC025678.1-201ENST00000567861 338 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 MIR4660-201ENST00000583549 74 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.57□□□□□ -1.68
CLRN1P58418 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 RPL23AP92-201ENST00000603609 255 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC007363.1-201ENST00000604736 620 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AL049634.3-201ENST00000604968 457 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC017083.3-201ENST00000609955 700 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 AL133173.2-201ENST00000614270 90 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 AC090527.3-201ENST00000619041 548 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 MIR1321-201ENST00000637766 79 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLRN1P58418 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CLRN1P58418 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLRN1P58418 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.57□□□□□ -1.68
CLRN1P58418 AC004817.4-201ENST00000602396 3625 ntBASIC4.57□□□□□ -1.68
CLRN1P58418 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLRN1P58418 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 AC235565.1-201ENST00000456962 1325 ntBASIC4.56□□□□□ -1.68
CLRN1P58418 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLRN1P58418 OR5J1P-201ENST00000313544 939 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms