Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.31□□□□□ -1.88
VSX2P58304 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VSX2P58304 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
VSX2P58304 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VSX2P58304 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX2P58304 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VSX2P58304 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX2P58304 DCAF13P1-201ENST00000495256 1330 ntBASIC3.3□□□□□ -1.88
VSX2P58304 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
VSX2P58304 RNU6-543P-201ENST00000362576 108 ntBASIC3.3□□□□□ -1.88
VSX2P58304 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
VSX2P58304 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VSX2P58304 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VSX2P58304 HMGB3P18-201ENST00000406327 590 ntBASIC3.3□□□□□ -1.88
VSX2P58304 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.3□□□□□ -1.88
VSX2P58304 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.3□□□□□ -1.88
VSX2P58304 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AIMP1P1-201ENST00000418670 937 ntBASIC3.3□□□□□ -1.88
VSX2P58304 MTCYBP31-201ENST00000438855 1122 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AC097499.1-201ENST00000444277 208 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
VSX2P58304 SETP14-201ENST00000497538 873 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.3□□□□□ -1.88
VSX2P58304 AC110792.2-201ENST00000510278 224 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.3□□□□□ -1.88
VSX2P58304 AC025918.2-201ENST00000558683 763 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.3□□□□□ -1.88
VSX2P58304 AC090751.1-201ENST00000566966 267 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 BNIP3P38-201ENST00000601117 544 ntBASIC3.3□□□□□ -1.88
VSX2P58304 ELOCP35-201ENST00000604289 336 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC018618.2-201ENST00000604770 446 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC012468.1-201ENST00000604888 430 ntBASIC3.3□□□□□ -1.88
VSX2P58304 AC007179.3-201ENST00000604976 235 ntBASIC3.3□□□□□ -1.88
VSX2P58304 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.3□□□□□ -1.88
VSX2P58304 ZNF90P1-201ENST00000480493 1951 ntBASIC3.3□□□□□ -1.88
VSX2P58304 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VSX2P58304 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VSX2P58304 AC091152.2-201ENST00000591628 2569 ntBASIC3.29□□□□□ -1.88
VSX2P58304 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VSX2P58304 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
VSX2P58304 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VSX2P58304 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VSX2P58304 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VSX2P58304 AC234772.1-201ENST00000377927 937 ntBASIC3.29□□□□□ -1.88
VSX2P58304 EI24P2-201ENST00000397776 1076 ntBASIC3.29□□□□□ -1.88
VSX2P58304 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
VSX2P58304 RNU2-17P-201ENST00000410290 190 ntBASIC3.29□□□□□ -1.88
VSX2P58304 RPS7P15-201ENST00000415804 584 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX2P58304 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.29□□□□□ -1.88
VSX2P58304 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX2P58304 HMGB3P30-201ENST00000457863 606 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC096992.1-201ENST00000459808 709 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AP000893.1-201ENST00000474462 794 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC078817.1-201ENST00000492623 435 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC111193.1-201ENST00000504097 155 ntBASIC3.29□□□□□ -1.88
VSX2P58304 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
VSX2P58304 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX2P58304 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.29□□□□□ -1.88
VSX2P58304 AC139103.1-201ENST00000534696 1030 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.29□□□□□ -1.88
VSX2P58304 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.29□□□□□ -1.88
VSX2P58304 AC011611.1-201ENST00000552179 197 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AL389895.1-201ENST00000554127 252 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.29□□□□□ -1.88
VSX2P58304 AL731537.2-201ENST00000561565 951 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.29□□□□□ -1.88
VSX2P58304 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.29□□□□□ -1.88
VSX2P58304 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.29□□□□□ -1.88
VSX2P58304 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
VSX2P58304 MIR4278-201ENST00000636094 69 ntBASIC3.29□□□□□ -1.88
VSX2P58304 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
VSX2P58304 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VSX2P58304 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VSX2P58304 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.28□□□□□ -1.88
VSX2P58304 MTND4P21-201ENST00000453886 1357 ntBASIC3.28□□□□□ -1.88
VSX2P58304 AC138915.3-201ENST00000562908 1389 ntBASIC3.28□□□□□ -1.88
VSX2P58304 HNRNPDP2-201ENST00000406475 478 ntBASIC3.28□□□□□ -1.88
VSX2P58304 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
VSX2P58304 VTA1P1-201ENST00000414044 866 ntBASIC3.28□□□□□ -1.88
VSX2P58304 PRELID3BP11-201ENST00000414230 479 ntBASIC3.28□□□□□ -1.88
VSX2P58304 OR1AA1P-201ENST00000419597 916 ntBASIC3.28□□□□□ -1.88
VSX2P58304 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
VSX2P58304 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
VSX2P58304 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms