Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN18P56856 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN18P56856 RPS29P4-201ENST00000414733 161 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN18P56856 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN18P56856 AL590103.1-201ENST00000434488 307 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC007000.2-201ENST00000442564 487 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AL035407.2-201ENST00000454090 378 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 DNAJC19P1-201ENST00000455312 319 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 MTND2P6-201ENST00000455337 1030 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN18P56856 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN18P56856 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN18P56856 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN18P56856 RN7SKP13-201ENST00000515933 244 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AF279873.1-201ENST00000523393 313 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC023161.2-201ENST00000551218 780 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AL389895.1-201ENST00000554127 252 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN18P56856 AC233266.2-201ENST00000567067 528 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC010735.1-201ENST00000567305 1026 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN18P56856 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CLDN18P56856 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN18P56856 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 AL732618.1-201ENST00000623251 301 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN18P56856 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN18P56856 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
CLDN18P56856 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLDN18P56856 RNU6-252P-201ENST00000363232 107 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 RNU6-374P-201ENST00000364146 108 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 HSPE1P8-201ENST00000406997 288 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 RPS3AP25-201ENST00000411660 793 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 MTND4P22-201ENST00000413116 1169 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 CR848007.2-201ENST00000424918 787 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN18P56856 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 MTND5P8-201ENST00000449817 1083 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 SLC31A1P1-201ENST00000451221 567 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC034236.1-201ENST00000469891 373 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 BTF3L4P4-201ENST00000506381 449 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 MTCO2P32-201ENST00000514865 403 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 RNU6-488P-201ENST00000515918 99 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 RNU6-202P-201ENST00000515998 96 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 OR8I1P-201ENST00000529291 931 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN18P56856 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC069209.1-201ENST00000619282 651 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 AC092608.3-201ENST00000625017 386 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC068620.4-201ENST00000636730 1182 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 LINC00561-201ENST00000565815 2738 ntBASIC3.24□□□□□ -1.89
CLDN18P56856 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN18P56856 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN18P56856 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CLDN18P56856 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLDN18P56856 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLDN18P56856 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLDN18P56856 RNA5SP295-201ENST00000362655 121 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 MIR525-201ENST00000384978 85 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms