Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH11P55287 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.84□□□□□ -1.79
CDH11P55287 AC091946.2-201ENST00000606105 291 ntBASIC3.84□□□□□ -1.79
CDH11P55287 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 AC114781.5-201ENST00000615297 108 ntBASIC3.84□□□□□ -1.79
CDH11P55287 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH11P55287 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH11P55287 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AP000843.1-201ENST00000624880 701 ntBASIC3.84□□□□□ -1.79
CDH11P55287 AC068620.4-201ENST00000636730 1182 ntBASIC3.84□□□□□ -1.79
CDH11P55287 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.84□□□□□ -1.79
CDH11P55287 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CDH11P55287 MTND4P34-201ENST00000572715 1371 ntBASIC3.84□□□□□ -1.79
CDH11P55287 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
CDH11P55287 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH11P55287 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.84□□□□□ -1.8
CDH11P55287 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH11P55287 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.84□□□□□ -1.8
CDH11P55287 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH11P55287 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CDH11P55287 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 RNU1-130P-201ENST00000363930 160 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH11P55287 RNY3P9-201ENST00000384727 106 ntBASIC3.83□□□□□ -1.8
CDH11P55287 DSTNP4-201ENST00000399472 474 ntBASIC3.83□□□□□ -1.8
CDH11P55287 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC006960.1-201ENST00000419980 153 ntBASIC3.83□□□□□ -1.8
CDH11P55287 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH11P55287 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 AL606662.1-201ENST00000445763 553 ntBASIC3.83□□□□□ -1.8
CDH11P55287 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH11P55287 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 ART2BP-201ENST00000453501 499 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC053481.1-201ENST00000467217 306 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC010683.1-201ENST00000473673 378 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 AC093534.1-201ENST00000504977 132 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC010486.2-201ENST00000505572 483 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC090071.1-201ENST00000507713 644 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AL592156.1-201ENST00000508758 304 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC010587.2-201ENST00000511727 448 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 AC109445.1-201ENST00000512356 383 ntBASIC3.83□□□□□ -1.8
CDH11P55287 SNORA31.9-201ENST00000516429 84 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC105185.1-201ENST00000518705 535 ntBASIC3.83□□□□□ -1.8
CDH11P55287 IGHV3-32-201ENST00000519182 355 ntBASIC3.83□□□□□ -1.8
CDH11P55287 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH11P55287 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 AP000926.4-201ENST00000527351 454 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AP003461.1-201ENST00000528866 78 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH11P55287 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH11P55287 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH11P55287 BNIP3P24-201ENST00000593398 557 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC113403.1-201ENST00000604910 193 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AL158042.1-201ENST00000605338 460 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC131235.4-201ENST00000609288 620 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC121761.2-201ENST00000617300 689 ntBASIC3.83□□□□□ -1.8
CDH11P55287 MIR6864-201ENST00000617935 70 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC048344.4-201ENST00000619744 527 ntBASIC3.83□□□□□ -1.8
CDH11P55287 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC131159.1-201ENST00000621854 213 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC098679.5-201ENST00000624394 571 ntBASIC3.83□□□□□ -1.8
CDH11P55287 AC116618.1-201ENST00000634617 774 ntBASIC3.83□□□□□ -1.8
CDH11P55287 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH11P55287 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 AC025125.1-201ENST00000624743 1922 ntBASIC3.83□□□□□ -1.8
CDH11P55287 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
CDH11P55287 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 AL031985.3-201ENST00000565390 2449 ntBASIC3.83□□□□□ -1.8
CDH11P55287 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH11P55287 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH11P55287 SAGE4P-201ENST00000442271 3381 ntBASIC3.83□□□□□ -1.8
CDH11P55287 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH11P55287 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH11P55287 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AL133412.1-201ENST00000380194 2992 ntBASIC3.82□□□□□ -1.8
CDH11P55287 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDH11P55287 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
CDH11P55287 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.82□□□□□ -1.8
CDH11P55287 ZNF542P-204ENST00000482727 1305 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC107982.1-201ENST00000507171 1300 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AC008033.1-201ENST00000216407 1162 ntBASIC3.82□□□□□ -1.8
CDH11P55287 ATP5F1P3-201ENST00000397213 657 ntBASIC3.82□□□□□ -1.8
CDH11P55287 AL450338.1-201ENST00000407987 512 ntBASIC3.82□□□□□ -1.8
CDH11P55287 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms