Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CR769776.1-201ENST00000441254 787 ntBASIC4.28□□□□□ -1.72
CDH8P55286 RPL23AP16-201ENST00000441715 421 ntBASIC4.28□□□□□ -1.72
CDH8P55286 RPL21P89-201ENST00000444021 467 ntBASIC4.28□□□□□ -1.72
CDH8P55286 RPL29P29-201ENST00000448725 423 ntBASIC4.28□□□□□ -1.72
CDH8P55286 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH8P55286 AL162388.1-201ENST00000450912 352 ntBASIC4.28□□□□□ -1.72
CDH8P55286 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH8P55286 AC013828.1-201ENST00000481845 158 ntBASIC4.28□□□□□ -1.72
CDH8P55286 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH8P55286 NDUFB4P12-201ENST00000513465 390 ntBASIC4.28□□□□□ -1.72
CDH8P55286 RNU6-1261P-201ENST00000517194 104 ntBASIC4.28□□□□□ -1.72
CDH8P55286 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.28□□□□□ -1.72
CDH8P55286 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH8P55286 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH8P55286 ZNF705CP-201ENST00000530515 889 ntBASIC4.28□□□□□ -1.72
CDH8P55286 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.28□□□□□ -1.72
CDH8P55286 AC092470.1-201ENST00000546187 132 ntBASIC4.28□□□□□ -1.72
CDH8P55286 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 AC022968.1-201ENST00000567372 442 ntBASIC4.28□□□□□ -1.72
CDH8P55286 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 AC073348.1-201ENST00000623002 331 ntBASIC4.28□□□□□ -1.72
CDH8P55286 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH8P55286 AC009452.1-201ENST00000640823 606 ntBASIC4.28□□□□□ -1.72
CDH8P55286 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH8P55286 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 NMD3P1-201ENST00000439704 1488 ntBASIC4.28□□□□□ -1.72
CDH8P55286 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH8P55286 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDH8P55286 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH8P55286 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH8P55286 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH8P55286 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CDH8P55286 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH8P55286 MIR448-201ENST00000362131 111 ntBASIC4.27□□□□□ -1.73
CDH8P55286 RNA5SP399-201ENST00000364003 117 ntBASIC4.27□□□□□ -1.73
CDH8P55286 SNORD116.1-201ENST00000365628 92 ntBASIC4.27□□□□□ -1.73
CDH8P55286 RPS3AP25-201ENST00000411660 793 ntBASIC4.27□□□□□ -1.73
CDH8P55286 MTND2P16-201ENST00000419987 799 ntBASIC4.27□□□□□ -1.73
CDH8P55286 RPL7P2-201ENST00000427639 268 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH8P55286 PTENP1-201ENST00000447117 1215 ntBASIC4.27□□□□□ -1.73
CDH8P55286 MTCO1P48-201ENST00000448024 1096 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AL359073.1-201ENST00000448036 403 ntBASIC4.27□□□□□ -1.73
CDH8P55286 FABP3P2-201ENST00000453169 399 ntBASIC4.27□□□□□ -1.73
CDH8P55286 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH8P55286 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH8P55286 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH8P55286 TRBV26-201ENST00000456572 344 ntBASIC4.27□□□□□ -1.73
CDH8P55286 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 AC008837.2-201ENST00000513076 418 ntBASIC4.27□□□□□ -1.73
CDH8P55286 HIGD1AP3-201ENST00000515857 278 ntBASIC4.27□□□□□ -1.73
CDH8P55286 RN7SKP265-201ENST00000516448 223 ntBASIC4.27□□□□□ -1.73
CDH8P55286 RNA5SP179-201ENST00000517284 121 ntBASIC4.27□□□□□ -1.73
CDH8P55286 OR5M7P-201ENST00000526140 972 ntBASIC4.27□□□□□ -1.73
CDH8P55286 OR4A45P-201ENST00000529954 901 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH8P55286 AC005832.3-201ENST00000537929 631 ntBASIC4.27□□□□□ -1.73
CDH8P55286 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH8P55286 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH8P55286 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH8P55286 TRAV15-201ENST00000556680 249 ntBASIC4.27□□□□□ -1.73
CDH8P55286 MTND4P33-201ENST00000556706 766 ntBASIC4.27□□□□□ -1.73
CDH8P55286 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH8P55286 AC107982.3-201ENST00000584957 985 ntBASIC4.27□□□□□ -1.73
CDH8P55286 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH8P55286 BNIP3P26-201ENST00000600827 554 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH8P55286 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH8P55286 AC091167.4-201ENST00000605079 184 ntBASIC4.27□□□□□ -1.73
CDH8P55286 MIR6875-201ENST00000617506 72 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AC013470.4-201ENST00000619978 986 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH8P55286 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CDH8P55286 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH8P55286 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH8P55286 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH8P55286 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH8P55286 AC016588.2-201ENST00000632484 3021 ntBASIC4.27□□□□□ -1.73
CDH8P55286 AC018529.3-201ENST00000624212 2254 ntBASIC4.26□□□□□ -1.73
CDH8P55286 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH8P55286 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH8P55286 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH8P55286 AC107982.1-201ENST00000507171 1300 ntBASIC4.26□□□□□ -1.73
CDH8P55286 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH8P55286 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH8P55286 RN7SKP280-201ENST00000364196 304 ntBASIC4.26□□□□□ -1.73
CDH8P55286 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
CDH8P55286 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
CDH8P55286 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDH8P55286 MIR134-201ENST00000385258 73 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms