Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 RPL12P3-201ENST00000440080 396 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 BTF3P6-201ENST00000448054 499 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC079448.1-201ENST00000449377 373 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 SNRPGP6-201ENST00000451124 220 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 SLC31A1P1-201ENST00000451221 567 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 RPL35P6-201ENST00000490024 372 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NCKAP1LP55160 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AP003072.1-201ENST00000531740 145 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC068993.1-201ENST00000546724 589 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC141257.3-201ENST00000572906 215 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AL161729.3-201ENST00000603533 673 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 YWHAQP7-201ENST00000603536 658 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC010424.2-201ENST00000607594 443 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.4□□□□□ -1.54
NCKAP1LP55160 AC006504.8-201ENST00000621046 635 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 AL160413.1-201ENST00000622780 310 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 PISRT1-201ENST00000626175 531 ntBASIC5.4□□□□□ -1.54
NCKAP1LP55160 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.55
NCKAP1LP55160 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NCKAP1LP55160 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.4□□□□□ -1.55
NCKAP1LP55160 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NCKAP1LP55160 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC100778.3-201ENST00000580060 1750 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 Z95331.1-201ENST00000623075 23112 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 RNU6-492P-201ENST00000363035 104 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 Y_RNA.409-201ENST00000383990 98 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 RPS3AP36-201ENST00000398190 775 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL450338.1-201ENST00000407987 512 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 RNU6-908P-201ENST00000410160 94 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 COX6B1P1-201ENST00000415962 213 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC234781.4-201ENST00000419384 244 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC083875.1-201ENST00000419509 405 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 NIPA2P1-201ENST00000426223 976 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL158073.1-201ENST00000426848 1104 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 YWHAQP9-201ENST00000445891 512 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL590365.1-201ENST00000450788 243 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 RN7SL591P-201ENST00000496150 292 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC098799.3-201ENST00000506095 438 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 RNU6-513P-201ENST00000516104 104 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AP003467.2-201ENST00000520175 319 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AP001922.4-201ENST00000526967 290 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 EIF4A2P5-201ENST00000529914 499 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AP003122.4-201ENST00000530980 758 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC068587.4-201ENST00000533893 186 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 POLR2KP1-201ENST00000553226 168 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 RPL21P5-201ENST00000554662 472 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC009117.1-201ENST00000563948 554 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC007448.1-201ENST00000582714 234 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AL022401.1-201ENST00000619498 108 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC015871.5-202ENST00000623252 701 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
NCKAP1LP55160 AC009643.2-201ENST00000603543 1448 ntBASIC5.39□□□□□ -1.55
NCKAP1LP55160 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCKAP1LP55160 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms