Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 AC068714.1-201ENST00000559623 800 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 HSPE1P5-201ENST00000561489 272 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 AL451044.1-201ENST00000604867 238 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AL450489.1-201ENST00000612071 468 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MIR7975-201ENST00000619350 68 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC091304.6-201ENST00000619761 202 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HCFC1P51610 MIR4278-201ENST00000636094 69 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AP003399.1-201ENST00000637534 361 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC138393.1-206ENST00000540997 1886 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 SNORD74.4-201ENST00000364129 80 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 RNU6-353P-201ENST00000364266 108 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 AC019155.1-201ENST00000382242 574 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 SNORD116-8-201ENST00000384365 95 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MIR490-201ENST00000384865 128 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC114814.2-201ENST00000419195 485 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC091390.3-201ENST00000426478 338 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 PPIAP17-201ENST00000438507 471 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 SETD6P1-201ENST00000444575 317 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HCFC1P51610 AL050341.1-201ENST00000447743 313 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC005229.2-201ENST00000456995 399 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 RN7SL293P-201ENST00000481765 281 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 MTCYBP16-201ENST00000509187 1129 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC079395.1-201ENST00000510981 262 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC119751.5-201ENST00000514077 770 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC022695.1-201ENST00000522089 237 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AP003461.1-201ENST00000528866 78 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC063950.1-201ENST00000552036 308 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC1P51610 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC1P51610 OR4K7P-201ENST00000580232 945 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AL109653.1-201ENST00000603091 248 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 AL353778.1-201ENST00000603149 408 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 MRPS35P3-201ENST00000603189 709 ntBASIC3.41□□□□□ -1.86
HCFC1P51610 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.4□□□□□ -1.86
HCFC1P51610 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC1P51610 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
HCFC1P51610 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
HCFC1P51610 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HCFC1P51610 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC1P51610 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC1P51610 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC1P51610 Y_RNA.192-201ENST00000363977 102 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC1P51610 RNU6-549P-201ENST00000384433 107 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 RNU6-636P-201ENST00000384598 107 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC096664.2-201ENST00000411843 406 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 MTCO1P3-201ENST00000429327 192 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 MOB1AP1-201ENST00000430903 535 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 RPS6P15-201ENST00000431996 751 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 RPS26P40-201ENST00000435209 294 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 HSPD1P21-201ENST00000436541 245 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AL450263.2-201ENST00000439400 589 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 RNU7-140P-201ENST00000459546 60 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC008885.2-201ENST00000509506 930 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC104619.4-201ENST00000510773 249 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC1P51610 AL132657.2-201ENST00000564417 358 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 BPTFP1-201ENST00000579209 492 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 AC022069.1-201ENST00000582910 658 ntBASIC3.4□□□□□ -1.87
HCFC1P51610 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms