Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.03□□□□□ -1.92
BRCA2P51587 RPL5P30-201ENST00000465511 891 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.03□□□□□ -1.92
BRCA2P51587 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.03□□□□□ -1.92
BRCA2P51587 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.03□□□□□ -1.92
BRCA2P51587 SEC11B-201ENST00000518383 499 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.03□□□□□ -1.92
BRCA2P51587 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.03□□□□□ -1.92
BRCA2P51587 OR4G1P-202ENST00000641173 1788 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
BRCA2P51587 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
BRCA2P51587 MIR499A-201ENST00000384903 122 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 MTND2P11-201ENST00000423638 648 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 HMGB3P6-201ENST00000444896 598 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 RPL29P29-201ENST00000448725 423 ntBASIC3.03□□□□□ -1.92
BRCA2P51587 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.03□□□□□ -1.92
BRCA2P51587 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.03□□□□□ -1.92
BRCA2P51587 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.03□□□□□ -1.92
BRCA2P51587 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.03□□□□□ -1.92
BRCA2P51587 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
BRCA2P51587 AL662791.1-201ENST00000441992 928 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 RNU4-26P-201ENST00000410270 107 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 AC009414.1-201ENST00000427200 443 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 OR5BN1P-201ENST00000532955 829 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.02□□□□□ -1.93
BRCA2P51587 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BRCA2P51587 AC018555.1-201ENST00000567548 1980 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.02□□□□□ -1.93
BRCA2P51587 CYCSP45-201ENST00000402289 315 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BRCA2P51587 MIR4781-201ENST00000585250 76 ntBASIC3.02□□□□□ -1.93
BRCA2P51587 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRCA2P51587 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
BRCA2P51587 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.01□□□□□ -1.93
BRCA2P51587 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.01□□□□□ -1.93
BRCA2P51587 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.01□□□□□ -1.93
BRCA2P51587 AC010620.2-201ENST00000600135 313 ntBASIC3.01□□□□□ -1.93
BRCA2P51587 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
BRCA2P51587 BTF3P7-201ENST00000407097 488 ntBASIC3.01□□□□□ -1.93
BRCA2P51587 CACYBPP2-201ENST00000453625 678 ntBASIC3.01□□□□□ -1.93
BRCA2P51587 RPL23AP31-201ENST00000456160 467 ntBASIC3.01□□□□□ -1.93
BRCA2P51587 MIR4727-201ENST00000622232 55 ntBASIC3.01□□□□□ -1.93
BRCA2P51587 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRCA2P51587 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BRCA2P51587 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
BRCA2P51587 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRCA2P51587 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
BRCA2P51587 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
BRCA2P51587 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
BRCA2P51587 RN7SKP199-201ENST00000410325 305 ntBASIC3□□□□□ -1.93
BRCA2P51587 AL137014.1-201ENST00000420490 1226 ntBASIC3□□□□□ -1.93
BRCA2P51587 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3□□□□□ -1.93
BRCA2P51587 MTCO3P16-201ENST00000454456 754 ntBASIC3□□□□□ -1.93
BRCA2P51587 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3□□□□□ -1.93
BRCA2P51587 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
BRCA2P51587 RPL23AP70-201ENST00000483361 460 ntBASIC3□□□□□ -1.93
BRCA2P51587 AC006445.2-201ENST00000510061 472 ntBASIC3□□□□□ -1.93
BRCA2P51587 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3□□□□□ -1.93
BRCA2P51587 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3□□□□□ -1.93
BRCA2P51587 AC080128.1-201ENST00000474389 1917 ntBASIC3□□□□□ -1.93
BRCA2P51587 AC104027.1-201ENST00000521887 300 ntBASIC3□□□□□ -1.93
BRCA2P51587 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3□□□□□ -1.93
BRCA2P51587 AC022884.3-201ENST00000579571 248 ntBASIC3□□□□□ -1.93
BRCA2P51587 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 AL592494.2-201ENST00000425455 1548 ntBASIC3□□□□□ -1.93
BRCA2P51587 AP000641.1-201ENST00000531988 1639 ntBASIC3□□□□□ -1.93
BRCA2P51587 SNORA80E-201ENST00000384744 137 ntBASIC3□□□□□ -1.93
BRCA2P51587 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3□□□□□ -1.93
BRCA2P51587 RPL7P52-201ENST00000449200 742 ntBASIC3□□□□□ -1.93
BRCA2P51587 OR4G11P-201ENST00000492842 939 ntBASIC3□□□□□ -1.93
BRCA2P51587 AC025034.2-201ENST00000623264 286 ntBASIC3□□□□□ -1.93
BRCA2P51587 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3□□□□□ -1.93
BRCA2P51587 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
BRCA2P51587 ZNF72P-201ENST00000425869 1908 ntBASIC3□□□□□ -1.93
BRCA2P51587 SNORA64-201ENST00000384674 134 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRCA2P51587 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.99□□□□□ -1.93
BRCA2P51587 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA2P51587 RNA5SP320-201ENST00000516263 124 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA2P51587 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.99□□□□□ -1.93
BRCA2P51587 AC019072.1-201ENST00000604535 1551 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 RNA5SP104-201ENST00000410989 118 ntBASIC2.99□□□□□ -1.93
BRCA2P51587 HMGB1P48-201ENST00000446155 598 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms