Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.71□□□□□ -1.82
CASP4P49662 AC083923.1-201ENST00000523708 376 ntBASIC3.71□□□□□ -1.82
CASP4P49662 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.71□□□□□ -1.82
CASP4P49662 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.71□□□□□ -1.82
CASP4P49662 CENPUP2-201ENST00000555897 1186 ntBASIC3.71□□□□□ -1.82
CASP4P49662 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.71□□□□□ -1.82
CASP4P49662 U3.45-201ENST00000607547 219 ntBASIC3.71□□□□□ -1.82
CASP4P49662 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
CASP4P49662 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.71□□□□□ -1.82
CASP4P49662 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASP4P49662 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 ENSAP3-201ENST00000312710 333 ntBASIC3.7□□□□□ -1.82
CASP4P49662 MIR153-1-201ENST00000384914 90 ntBASIC3.7□□□□□ -1.82
CASP4P49662 MIR670-201ENST00000390142 98 ntBASIC3.7□□□□□ -1.82
CASP4P49662 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CASP4P49662 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
CASP4P49662 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CASP4P49662 SNORA11-201ENST00000408789 128 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.7□□□□□ -1.82
CASP4P49662 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.7□□□□□ -1.82
CASP4P49662 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.7□□□□□ -1.82
CASP4P49662 CYCSP43-201ENST00000438233 310 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.7□□□□□ -1.82
CASP4P49662 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.7□□□□□ -1.82
CASP4P49662 AL035407.2-201ENST00000454090 378 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC008155.2-201ENST00000464337 397 ntBASIC3.7□□□□□ -1.82
CASP4P49662 RN7SL293P-201ENST00000481765 281 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.7□□□□□ -1.82
CASP4P49662 ARL2BPP6-201ENST00000512757 439 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.7□□□□□ -1.82
CASP4P49662 AC139103.1-201ENST00000534696 1030 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.7□□□□□ -1.82
CASP4P49662 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.7□□□□□ -1.82
CASP4P49662 AC011602.1-201ENST00000546484 331 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.7□□□□□ -1.82
CASP4P49662 AL442163.2-201ENST00000553912 710 ntBASIC3.7□□□□□ -1.82
CASP4P49662 SERPINE4P-201ENST00000554978 281 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.7□□□□□ -1.82
CASP4P49662 MIR4444-1-201ENST00000581696 74 ntBASIC3.7□□□□□ -1.82
CASP4P49662 MIR4444-2-201ENST00000584390 74 ntBASIC3.7□□□□□ -1.82
CASP4P49662 Z82195.1-201ENST00000604558 398 ntBASIC3.7□□□□□ -1.82
CASP4P49662 RMST_8.1-201ENST00000610287 165 ntBASIC3.7□□□□□ -1.82
CASP4P49662 FRG1HP-204ENST00000617940 757 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AC017104.5-201ENST00000637647 639 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AL163152.1-201ENST00000642001 374 ntBASIC3.7□□□□□ -1.82
CASP4P49662 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.7□□□□□ -1.82
CASP4P49662 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
CASP4P49662 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASP4P49662 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 AL512646.1-201ENST00000269395 1077 ntBASIC3.69□□□□□ -1.82
CASP4P49662 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 RNU6-543P-201ENST00000362576 108 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RNA5SP27-201ENST00000363839 119 ntBASIC3.69□□□□□ -1.82
CASP4P49662 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 RNU6-356P-201ENST00000384140 107 ntBASIC3.69□□□□□ -1.82
CASP4P49662 SNORA70E-201ENST00000384492 135 ntBASIC3.69□□□□□ -1.82
CASP4P49662 PRRC2CP1-201ENST00000404428 159 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RN7SKP27-201ENST00000410684 333 ntBASIC3.69□□□□□ -1.82
CASP4P49662 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 AL356968.1-201ENST00000416622 474 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AL513174.1-201ENST00000423182 629 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC073508.1-201ENST00000428866 656 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
CASP4P49662 CENPBD1P1-201ENST00000464061 469 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RPL37P6-202ENST00000464216 403 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC021205.2-201ENST00000480069 347 ntBASIC3.69□□□□□ -1.82
CASP4P49662 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 IGKV2-23-201ENST00000518729 323 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.69□□□□□ -1.82
CASP4P49662 OR4R3P-201ENST00000525084 838 ntBASIC3.69□□□□□ -1.82
CASP4P49662 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.69□□□□□ -1.82
CASP4P49662 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
CASP4P49662 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 AL365503.1-201ENST00000605247 905 ntBASIC3.69□□□□□ -1.82
CASP4P49662 RNA5SP108-201ENST00000605921 117 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC113194.1-201ENST00000606037 500 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AL359535.1-201ENST00000612100 1087 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC138649.5-201ENST00000637456 137 ntBASIC3.69□□□□□ -1.82
CASP4P49662 FAM157B-203ENST00000639350 358 ntBASIC3.69□□□□□ -1.82
CASP4P49662 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASP4P49662 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.69□□□□□ -1.82
CASP4P49662 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
CASP4P49662 AC104446.1-201ENST00000613728 1321 ntBASIC3.69□□□□□ -1.82
CASP4P49662 AC000367.1-201ENST00000452711 1766 ntBASIC3.68□□□□□ -1.82
CASP4P49662 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CASP4P49662 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CASP4P49662 SNORA48.7-201ENST00000391302 135 ntBASIC3.68□□□□□ -1.82
CASP4P49662 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASP4P49662 RN7SKP111-201ENST00000410349 271 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms