Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HTTP42858 OR4G1P-202ENST00000641173 1788 ntBASIC3.04□□□□□ -1.92
HTTP42858 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.04□□□□□ -1.92
HTTP42858 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.04□□□□□ -1.92
HTTP42858 HMGB3P6-201ENST00000444896 598 ntBASIC3.04□□□□□ -1.92
HTTP42858 CACYBPP2-201ENST00000453625 678 ntBASIC3.04□□□□□ -1.92
HTTP42858 SEC11B-201ENST00000518383 499 ntBASIC3.04□□□□□ -1.92
HTTP42858 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.04□□□□□ -1.92
HTTP42858 AC015712.3-201ENST00000559380 164 ntBASIC3.04□□□□□ -1.92
HTTP42858 AC025034.2-201ENST00000623264 286 ntBASIC3.04□□□□□ -1.92
HTTP42858 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HTTP42858 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
HTTP42858 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
HTTP42858 MIR489-201ENST00000384923 84 ntBASIC3.03□□□□□ -1.92
HTTP42858 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.03□□□□□ -1.92
HTTP42858 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.03□□□□□ -1.92
HTTP42858 AC092013.1-201ENST00000438795 332 ntBASIC3.03□□□□□ -1.92
HTTP42858 RPL23AP31-201ENST00000456160 467 ntBASIC3.03□□□□□ -1.92
HTTP42858 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.03□□□□□ -1.92
HTTP42858 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.03□□□□□ -1.92
HTTP42858 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HTTP42858 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC3.03□□□□□ -1.92
HTTP42858 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HTTP42858 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.03□□□□□ -1.92
HTTP42858 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 TRIM60P18-201ENST00000441518 828 ntBASIC3.03□□□□□ -1.92
HTTP42858 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HTTP42858 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
HTTP42858 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.02□□□□□ -1.93
HTTP42858 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.02□□□□□ -1.93
HTTP42858 AC092436.1-201ENST00000506450 503 ntBASIC3.02□□□□□ -1.93
HTTP42858 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.02□□□□□ -1.93
HTTP42858 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 Y_RNA.796-201ENST00000364268 102 ntBASIC3.02□□□□□ -1.93
HTTP42858 Y_RNA.799-201ENST00000364992 102 ntBASIC3.02□□□□□ -1.93
HTTP42858 AL135786.1-201ENST00000415892 214 ntBASIC3.02□□□□□ -1.93
HTTP42858 AC074276.2-201ENST00000619891 348 ntBASIC3.02□□□□□ -1.93
HTTP42858 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HTTP42858 AL356320.1-201ENST00000429616 163 ntBASIC3.02□□□□□ -1.93
HTTP42858 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
HTTP42858 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.02□□□□□ -1.93
HTTP42858 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.02□□□□□ -1.93
HTTP42858 AC104027.1-201ENST00000521887 300 ntBASIC3.02□□□□□ -1.93
HTTP42858 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.02□□□□□ -1.93
HTTP42858 AC046143.2-201ENST00000609789 160 ntBASIC3.02□□□□□ -1.93
HTTP42858 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.02□□□□□ -1.93
HTTP42858 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 AC005332.5-201ENST00000591222 2919 ntBASIC3.01□□□□□ -1.93
HTTP42858 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 MIR26A1-201ENST00000362205 77 ntBASIC3.01□□□□□ -1.93
HTTP42858 SNORA17.3-201ENST00000391159 129 ntBASIC3.01□□□□□ -1.93
HTTP42858 RNU4-26P-201ENST00000410270 107 ntBASIC3.01□□□□□ -1.93
HTTP42858 AL137014.1-201ENST00000420490 1226 ntBASIC3.01□□□□□ -1.93
HTTP42858 GLRXP1-201ENST00000423261 334 ntBASIC3.01□□□□□ -1.93
HTTP42858 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.01□□□□□ -1.93
HTTP42858 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.01□□□□□ -1.93
HTTP42858 HMGB1P15-201ENST00000453854 435 ntBASIC3.01□□□□□ -1.93
HTTP42858 MIR2276-201ENST00000516886 89 ntBASIC3.01□□□□□ -1.93
HTTP42858 AC010620.2-201ENST00000600135 313 ntBASIC3.01□□□□□ -1.93
HTTP42858 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.01□□□□□ -1.93
HTTP42858 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.01□□□□□ -1.93
HTTP42858 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HTTP42858 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HTTP42858 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 RPL23AP71-201ENST00000470966 469 ntBASIC3.01□□□□□ -1.93
HTTP42858 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HTTP42858 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.01□□□□□ -1.93
HTTP42858 AL356490.1-201ENST00000623079 479 ntBASIC3.01□□□□□ -1.93
HTTP42858 CEP170P1-201ENST00000502249 4587 ntBASIC3.01□□□□□ -1.93
HTTP42858 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC3.01□□□□□ -1.93
HTTP42858 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HTTP42858 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
HTTP42858 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3□□□□□ -1.93
HTTP42858 AL590290.1-201ENST00000405336 380 ntBASIC3□□□□□ -1.93
HTTP42858 RPL23AP4-201ENST00000427757 463 ntBASIC3□□□□□ -1.93
HTTP42858 AC010469.1-201ENST00000463864 576 ntBASIC3□□□□□ -1.93
HTTP42858 AC108078.3-201ENST00000502633 489 ntBASIC3□□□□□ -1.93
HTTP42858 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3□□□□□ -1.93
HTTP42858 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HTTP42858 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HTTP42858 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms