Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 CR381670.1-201ENST00000624291 1693 ntBASIC4.63□□□□□ -1.67
HOXD12P35452 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXD12P35452 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXD12P35452 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXD12P35452 AL390862.1-201ENST00000635467 1469 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 DBF4P1-201ENST00000412976 1892 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 MTCO1P14-201ENST00000441695 1559 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC108467.2-201ENST00000617640 1597 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXD12P35452 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXD12P35452 Y_RNA.77-201ENST00000362962 107 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU6-492P-201ENST00000363035 104 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU4-24P-201ENST00000364565 139 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU6-621P-201ENST00000364752 109 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU1-64P-201ENST00000365443 163 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU6-253P-201ENST00000384730 105 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RNU1-82P-201ENST00000390851 165 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 SSXP10-201ENST00000402595 565 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AL031577.2-201ENST00000404133 280 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AL445189.1-201ENST00000405722 338 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 HDGFP1-201ENST00000405943 252 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AL139098.1-201ENST00000407291 389 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RN7SKP177-201ENST00000410567 355 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RPL31P2-201ENST00000413849 377 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 BOLA3P4-201ENST00000418151 400 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC096632.1-201ENST00000427395 310 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RPL31P54-201ENST00000429803 370 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 RPS6P12-201ENST00000432491 726 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC011998.1-201ENST00000433403 117 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 CKS1BP5-201ENST00000434172 273 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC129850.1-201ENST00000436203 508 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC079168.2-201ENST00000453977 416 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD12P35452 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC005178.1-201ENST00000508392 440 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXD12P35452 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.62□□□□□ -1.67
HOXD12P35452 AL121766.1-201ENST00000547436 487 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC024909.2-201ENST00000553035 286 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 ACTR3BP3-201ENST00000565577 979 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC074051.3-201ENST00000570238 358 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD12P35452 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC103987.3-201ENST00000582071 292 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC068790.2-201ENST00000602601 557 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC025165.5-201ENST00000602802 578 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 YWHAQP7-201ENST00000603536 658 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC073114.1-201ENST00000612027 490 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC078899.5-201ENST00000612475 178 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 AC008083.4-201ENST00000615076 444 ntBASIC4.62□□□□□ -1.67
HOXD12P35452 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD12P35452 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD12P35452 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD12P35452 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXD12P35452 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD12P35452 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXD12P35452 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD12P35452 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD12P35452 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD12P35452 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD12P35452 SNORD96B-201ENST00000386148 79 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 RNA5SP372-201ENST00000390836 115 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 SNORA48.7-201ENST00000391302 135 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 RPS26P8-201ENST00000393490 348 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 CEACAMP8-201ENST00000413902 580 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD12P35452 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD12P35452 COX6CP15-201ENST00000426313 211 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 RPS12P10-201ENST00000427031 377 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 MTND1P20-201ENST00000430341 950 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 AC010153.1-201ENST00000432862 727 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 RPS25P9-201ENST00000435591 252 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD12P35452 RPL7AP61-201ENST00000443410 636 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 AL590399.6-201ENST00000446396 307 ntBASIC4.61□□□□□ -1.67
HOXD12P35452 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD12P35452 AC114755.5-201ENST00000447760 831 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms