Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPA3P35244 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPA3P35244 MIR490-201ENST00000384865 128 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AL590290.1-201ENST00000405336 380 ntBASIC3.26□□□□□ -1.89
RPA3P35244 HNRNPDP2-201ENST00000406475 478 ntBASIC3.26□□□□□ -1.89
RPA3P35244 BX323014.1-201ENST00000412876 237 ntBASIC3.26□□□□□ -1.89
RPA3P35244 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPA3P35244 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.26□□□□□ -1.89
RPA3P35244 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.26□□□□□ -1.89
RPA3P35244 AC008065.1-201ENST00000428525 348 ntBASIC3.26□□□□□ -1.89
RPA3P35244 YME1L1P1-201ENST00000429435 297 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.26□□□□□ -1.89
RPA3P35244 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 AC096992.1-201ENST00000459808 709 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.26□□□□□ -1.89
RPA3P35244 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.26□□□□□ -1.89
RPA3P35244 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPA3P35244 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.26□□□□□ -1.89
RPA3P35244 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.26□□□□□ -1.89
RPA3P35244 MIR4444-1-201ENST00000581696 74 ntBASIC3.26□□□□□ -1.89
RPA3P35244 MIR4444-2-201ENST00000584390 74 ntBASIC3.26□□□□□ -1.89
RPA3P35244 MIMT1-201ENST00000597105 1050 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AC073111.2-201ENST00000605657 1075 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AL591516.1-201ENST00000611326 274 ntBASIC3.26□□□□□ -1.89
RPA3P35244 U6.48-201ENST00000618523 106 ntBASIC3.26□□□□□ -1.89
RPA3P35244 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
RPA3P35244 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.26□□□□□ -1.89
RPA3P35244 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPA3P35244 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
RPA3P35244 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPA3P35244 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPA3P35244 USP8P1-201ENST00000494673 3183 ntBASIC3.25□□□□□ -1.89
RPA3P35244 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RPA3P35244 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RPA3P35244 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.25□□□□□ -1.89
RPA3P35244 SNORA71.3-201ENST00000362582 128 ntBASIC3.25□□□□□ -1.89
RPA3P35244 SNORA46-201ENST00000384762 135 ntBASIC3.25□□□□□ -1.89
RPA3P35244 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.25□□□□□ -1.89
RPA3P35244 SNORA11-201ENST00000408789 128 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC010385.1-201ENST00000412374 256 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.25□□□□□ -1.89
RPA3P35244 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.25□□□□□ -1.89
RPA3P35244 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
RPA3P35244 OR2AS1P-201ENST00000427827 319 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AL159987.2-201ENST00000432754 307 ntBASIC3.25□□□□□ -1.89
RPA3P35244 RPL21P110-201ENST00000433345 446 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC005019.1-201ENST00000436455 431 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC009969.1-201ENST00000438726 172 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.25□□□□□ -1.89
RPA3P35244 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.25□□□□□ -1.89
RPA3P35244 PRSS3P4-201ENST00000453323 162 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC092451.1-201ENST00000480211 153 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC073522.1-201ENST00000483312 377 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC093663.1-201ENST00000497190 394 ntBASIC3.25□□□□□ -1.89
RPA3P35244 SUMO1P1-201ENST00000497904 306 ntBASIC3.25□□□□□ -1.89
RPA3P35244 HMGB1P3-201ENST00000502802 616 ntBASIC3.25□□□□□ -1.89
RPA3P35244 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.25□□□□□ -1.89
RPA3P35244 MIR4276-201ENST00000584832 70 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.25□□□□□ -1.89
RPA3P35244 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.25□□□□□ -1.89
RPA3P35244 AL162713.1-201ENST00000604480 262 ntBASIC3.25□□□□□ -1.89
RPA3P35244 MIR92B-201ENST00000607575 96 ntBASIC3.25□□□□□ -1.89
RPA3P35244 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.25□□□□□ -1.89
RPA3P35244 AC119674.1-220ENST00000641502 1048 ntBASIC3.25□□□□□ -1.89
RPA3P35244 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
RPA3P35244 GTF2H2B-203ENST00000508065 1432 ntBASIC3.25□□□□□ -1.89
RPA3P35244 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
RPA3P35244 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.24□□□□□ -1.89
RPA3P35244 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.24□□□□□ -1.89
RPA3P35244 ZNF33CP-201ENST00000432492 2030 ntBASIC3.24□□□□□ -1.89
RPA3P35244 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RPA3P35244 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
RPA3P35244 HMGB1P10-201ENST00000395823 563 ntBASIC3.24□□□□□ -1.89
RPA3P35244 DHFRP5-201ENST00000406944 564 ntBASIC3.24□□□□□ -1.89
RPA3P35244 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.24□□□□□ -1.89
RPA3P35244 RPF2P1-201ENST00000424137 906 ntBASIC3.24□□□□□ -1.89
RPA3P35244 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.24□□□□□ -1.89
RPA3P35244 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.24□□□□□ -1.89
RPA3P35244 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 ATP5C1P1-201ENST00000441945 895 ntBASIC3.24□□□□□ -1.89
RPA3P35244 HMGB3P6-201ENST00000444896 598 ntBASIC3.24□□□□□ -1.89
RPA3P35244 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RPA3P35244 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.24□□□□□ -1.89
RPA3P35244 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 AL049830.2-201ENST00000480072 201 ntBASIC3.24□□□□□ -1.89
RPA3P35244 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
RPA3P35244 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.24□□□□□ -1.89
RPA3P35244 RPL5P23-201ENST00000496040 868 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms