Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.42□□□□□ -1.38
RFX1P22670 OR7E18P-201ENST00000592589 702 ntBASIC6.42□□□□□ -1.38
RFX1P22670 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 AC068768.2-201ENST00000602352 343 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AC093388.1-201ENST00000609166 430 ntBASIC6.42□□□□□ -1.38
RFX1P22670 uc_338.26-201ENST00000612659 160 ntBASIC6.42□□□□□ -1.38
RFX1P22670 AC019278.1-201ENST00000623516 479 ntBASIC6.42□□□□□ -1.38
RFX1P22670 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
RFX1P22670 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.42□□□□□ -1.38
RFX1P22670 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RFX1P22670 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFX1P22670 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 ZNF402P-201ENST00000404435 3100 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX1P22670 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX1P22670 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 AL359893.1-201ENST00000447628 1580 ntBASIC6.41□□□□□ -1.38
RFX1P22670 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 MIR514A2-201ENST00000385131 88 ntBASIC6.41□□□□□ -1.38
RFX1P22670 MIR514A3-201ENST00000385132 88 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AL391361.1-201ENST00000405580 489 ntBASIC6.41□□□□□ -1.38
RFX1P22670 OR2W4P-201ENST00000406496 926 ntBASIC6.41□□□□□ -1.38
RFX1P22670 OR3A2-201ENST00000408891 1076 ntBASIC6.41□□□□□ -1.38
RFX1P22670 OR2AT2P-201ENST00000413438 905 ntBASIC6.41□□□□□ -1.38
RFX1P22670 DUTP6-201ENST00000425573 462 ntBASIC6.41□□□□□ -1.38
RFX1P22670 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 AL590399.2-201ENST00000427536 309 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AL445928.1-201ENST00000435545 222 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AC096775.1-201ENST00000437724 448 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AL663074.2-201ENST00000440621 479 ntBASIC6.41□□□□□ -1.38
RFX1P22670 HMGB3P9-201ENST00000441799 583 ntBASIC6.41□□□□□ -1.38
RFX1P22670 MTND3P16-201ENST00000452205 344 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RNU7-182P-201ENST00000459009 62 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RPL38P3-201ENST00000484463 213 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AC006499.3-201ENST00000506077 748 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RNU6-27P-201ENST00000516146 107 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RN7SKP219-201ENST00000516825 296 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RN7SKP277-201ENST00000516895 283 ntBASIC6.41□□□□□ -1.38
RFX1P22670 RNU6-1314P-201ENST00000517139 104 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.41□□□□□ -1.38
RFX1P22670 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.41□□□□□ -1.38
RFX1P22670 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.41□□□□□ -1.38
RFX1P22670 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.41□□□□□ -1.38
RFX1P22670 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.41□□□□□ -1.38
RFX1P22670 AL121992.2-201ENST00000606262 256 ntBASIC6.41□□□□□ -1.38
RFX1P22670 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 uc_338.11-201ENST00000619132 160 ntBASIC6.41□□□□□ -1.38
RFX1P22670 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFX1P22670 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFX1P22670 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 SMG1P6-201ENST00000532337 2930 ntBASIC6.41□□□□□ -1.38
RFX1P22670 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFX1P22670 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RFX1P22670 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
RFX1P22670 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RFX1P22670 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
RFX1P22670 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
RFX1P22670 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFX1P22670 AL645937.1-201ENST00000641739 1652 ntBASIC6.4□□□□□ -1.38
RFX1P22670 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFX1P22670 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFX1P22670 AC109446.4-201ENST00000623235 2755 ntBASIC6.4□□□□□ -1.38
RFX1P22670 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.4□□□□□ -1.38
RFX1P22670 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RFX1P22670 Y_RNA.231-201ENST00000364358 102 ntBASIC6.4□□□□□ -1.38
RFX1P22670 Y_RNA.326-201ENST00000365176 113 ntBASIC6.4□□□□□ -1.38
RFX1P22670 Y_RNA.394-201ENST00000383942 103 ntBASIC6.4□□□□□ -1.38
RFX1P22670 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.4□□□□□ -1.38
RFX1P22670 TXNP7-201ENST00000406296 293 ntBASIC6.4□□□□□ -1.38
RFX1P22670 RPS3AP2-201ENST00000407190 754 ntBASIC6.4□□□□□ -1.38
RFX1P22670 RN7SKP293-201ENST00000411389 296 ntBASIC6.4□□□□□ -1.38
RFX1P22670 AL645937.1-202ENST00000421799 937 ntBASIC6.4□□□□□ -1.38
RFX1P22670 AL355433.1-201ENST00000422804 300 ntBASIC6.4□□□□□ -1.38
RFX1P22670 MTCYBP8-201ENST00000422855 651 ntBASIC6.4□□□□□ -1.38
RFX1P22670 AC008065.1-201ENST00000428525 348 ntBASIC6.4□□□□□ -1.38
RFX1P22670 ERLEC1P1-201ENST00000433806 578 ntBASIC6.4□□□□□ -1.38
RFX1P22670 RPL12P46-201ENST00000436610 195 ntBASIC6.4□□□□□ -1.38
RFX1P22670 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.4□□□□□ -1.38
RFX1P22670 AC016696.1-201ENST00000446949 318 ntBASIC6.4□□□□□ -1.38
RFX1P22670 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.4□□□□□ -1.38
RFX1P22670 AL121877.1-201ENST00000453704 622 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms