Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.12□□□□□ -1.91
USF1P22415 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USF1P22415 RNU6-1339P-201ENST00000363574 91 ntBASIC3.12□□□□□ -1.91
USF1P22415 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USF1P22415 AC069218.2-201ENST00000411665 344 ntBASIC3.12□□□□□ -1.91
USF1P22415 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 FAR1P1-201ENST00000427163 934 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC093422.3-201ENST00000428506 305 ntBASIC3.12□□□□□ -1.91
USF1P22415 AL513175.1-201ENST00000431492 780 ntBASIC3.12□□□□□ -1.91
USF1P22415 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 FABP5P3-201ENST00000437960 408 ntBASIC3.12□□□□□ -1.91
USF1P22415 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 AC004865.1-201ENST00000442276 1003 ntBASIC3.12□□□□□ -1.91
USF1P22415 RPL21P23-201ENST00000446654 460 ntBASIC3.12□□□□□ -1.91
USF1P22415 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
USF1P22415 RPL23AP15-201ENST00000450202 459 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC233982.1-201ENST00000451247 436 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC073387.1-201ENST00000453261 709 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC005726.1-201ENST00000494679 427 ntBASIC3.12□□□□□ -1.91
USF1P22415 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
USF1P22415 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.12□□□□□ -1.91
USF1P22415 HIGD1AP3-201ENST00000515857 278 ntBASIC3.12□□□□□ -1.91
USF1P22415 RNU2-58P-201ENST00000516403 183 ntBASIC3.12□□□□□ -1.91
USF1P22415 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
USF1P22415 SUMO2P20-201ENST00000520803 283 ntBASIC3.12□□□□□ -1.91
USF1P22415 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.12□□□□□ -1.91
USF1P22415 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 AC006254.3-201ENST00000603353 884 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC079880.2-201ENST00000603790 1213 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC091488.1-201ENST00000604239 660 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.12□□□□□ -1.91
USF1P22415 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.12□□□□□ -1.91
USF1P22415 AL118508.4-201ENST00000624142 1176 ntBASIC3.12□□□□□ -1.91
USF1P22415 AP003400.6-201ENST00000624698 740 ntBASIC3.12□□□□□ -1.91
USF1P22415 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
USF1P22415 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 MTND5P28-201ENST00000438005 1594 ntBASIC3.12□□□□□ -1.91
USF1P22415 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.12□□□□□ -1.91
USF1P22415 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF1P22415 MTND4P8-201ENST00000514997 1362 ntBASIC3.12□□□□□ -1.91
USF1P22415 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.11□□□□□ -1.91
USF1P22415 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USF1P22415 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF1P22415 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
USF1P22415 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC016716.1-201ENST00000265882 708 ntBASIC3.11□□□□□ -1.91
USF1P22415 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USF1P22415 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF1P22415 SNORA31-201ENST00000362607 130 ntBASIC3.11□□□□□ -1.91
USF1P22415 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
USF1P22415 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USF1P22415 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
USF1P22415 AL159987.2-201ENST00000432754 307 ntBASIC3.11□□□□□ -1.91
USF1P22415 NEK4P1-201ENST00000433383 879 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC073063.1-201ENST00000434352 607 ntBASIC3.11□□□□□ -1.91
USF1P22415 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF1P22415 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF1P22415 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.11□□□□□ -1.91
USF1P22415 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 MTCO3P16-201ENST00000454456 754 ntBASIC3.11□□□□□ -1.91
USF1P22415 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 UBDP1-202ENST00000457888 382 ntBASIC3.11□□□□□ -1.91
USF1P22415 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF1P22415 AC133963.2-201ENST00000513686 578 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC016065.2-201ENST00000514530 444 ntBASIC3.11□□□□□ -1.91
USF1P22415 RN7SKP209-201ENST00000516888 304 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC104115.2-201ENST00000523026 687 ntBASIC3.11□□□□□ -1.91
USF1P22415 PDCL2P2-201ENST00000533651 189 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.11□□□□□ -1.91
USF1P22415 AC090877.1-201ENST00000561418 344 ntBASIC3.11□□□□□ -1.91
USF1P22415 AL133457.1-201ENST00000564251 987 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 AC099489.2-201ENST00000574976 260 ntBASIC3.11□□□□□ -1.91
USF1P22415 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
USF1P22415 MIR5195-201ENST00000583555 115 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.11□□□□□ -1.91
USF1P22415 AC020914.6-201ENST00000594327 272 ntBASIC3.11□□□□□ -1.91
USF1P22415 YWHAQP7-201ENST00000603536 658 ntBASIC3.11□□□□□ -1.91
USF1P22415 KATNBL1P5-201ENST00000605015 517 ntBASIC3.11□□□□□ -1.91
USF1P22415 RNU1-30P-201ENST00000606575 163 ntBASIC3.11□□□□□ -1.91
USF1P22415 AC018754.1-201ENST00000607486 925 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms