Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPL7L1P13-201ENST00000511702 739 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.28□□□□□ -1.88
COL11A1P12107 OR4C2P-201ENST00000530855 1064 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC234778.2-201ENST00000566241 354 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC006840.1-201ENST00000623069 542 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.28□□□□□ -1.88
COL11A1P12107 IGHVIII-44-202ENST00000636235 289 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC107027.3-201ENST00000565095 3473 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
COL11A1P12107 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL11A1P12107 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.28□□□□□ -1.88
COL11A1P12107 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.28□□□□□ -1.88
COL11A1P12107 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.28□□□□□ -1.88
COL11A1P12107 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL11A1P12107 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 SRIP1-201ENST00000489235 288 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.28□□□□□ -1.88
COL11A1P12107 AC083906.5-201ENST00000503722 328 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.28□□□□□ -1.88
COL11A1P12107 RNU1-41P-201ENST00000516161 162 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 RNU1-48P-201ENST00000516400 162 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.28□□□□□ -1.88
COL11A1P12107 AC022960.2-201ENST00000616300 666 ntBASIC3.28□□□□□ -1.88
COL11A1P12107 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.27□□□□□ -1.89
COL11A1P12107 GTF2IP23-201ENST00000423746 351 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.27□□□□□ -1.89
COL11A1P12107 AC073069.1-201ENST00000428657 441 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.27□□□□□ -1.89
COL11A1P12107 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.27□□□□□ -1.89
COL11A1P12107 AC239798.3-201ENST00000454459 408 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 AC106872.2-201ENST00000494303 480 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.27□□□□□ -1.89
COL11A1P12107 SCGB1D5P-201ENST00000515134 247 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.27□□□□□ -1.89
COL11A1P12107 AC010149.2-201ENST00000637608 315 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
COL11A1P12107 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL11A1P12107 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
COL11A1P12107 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
COL11A1P12107 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.26□□□□□ -1.89
COL11A1P12107 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 RNU1-35P-201ENST00000362782 153 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.26□□□□□ -1.89
COL11A1P12107 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.26□□□□□ -1.89
COL11A1P12107 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.26□□□□□ -1.89
COL11A1P12107 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 EIF5A2P1-201ENST00000564027 460 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 AC093775.1-201ENST00000624154 1868 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL11A1P12107 RNU1-87P-201ENST00000363727 170 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 SKINT1L-201ENST00000401057 817 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AL139039.1-201ENST00000401900 692 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.26□□□□□ -1.89
COL11A1P12107 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.26□□□□□ -1.89
COL11A1P12107 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.26□□□□□ -1.89
COL11A1P12107 COX6B1P6-201ENST00000522347 255 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AL049874.4-201ENST00000557593 255 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AL591516.1-201ENST00000611326 274 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AC131238.1-201ENST00000617135 328 ntBASIC3.26□□□□□ -1.89
COL11A1P12107 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.26□□□□□ -1.89
COL11A1P12107 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.25□□□□□ -1.89
COL11A1P12107 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL11A1P12107 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL11A1P12107 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL11A1P12107 RPL23AP4-201ENST00000427757 463 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 MTCO1P52-201ENST00000433928 531 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.25□□□□□ -1.89
COL11A1P12107 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 AC245517.2-201ENST00000442890 346 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 RAB28P3-201ENST00000448325 597 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.25□□□□□ -1.89
COL11A1P12107 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.25□□□□□ -1.89
COL11A1P12107 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
COL11A1P12107 AC111000.2-201ENST00000507775 550 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
COL11A1P12107 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.25□□□□□ -1.89
COL11A1P12107 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.25□□□□□ -1.89
COL11A1P12107 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL11A1P12107 U3.6-201ENST00000363622 211 ntBASIC3.24□□□□□ -1.89
COL11A1P12107 AC245054.2-201ENST00000415639 319 ntBASIC3.24□□□□□ -1.89
COL11A1P12107 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.24□□□□□ -1.89
COL11A1P12107 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.24□□□□□ -1.89
COL11A1P12107 MTCO1P51-201ENST00000427672 1060 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms