Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC6P09630 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC6P09630 AL049737.1-201ENST00000413920 1403 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 Y_RNA.51-201ENST00000362725 102 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 snoZ40.1-201ENST00000364540 72 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 RNU6-452P-201ENST00000384406 107 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 SNORD116-4-201ENST00000384733 96 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 MIR483-201ENST00000385070 76 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AL021407.1-201ENST00000404531 386 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXC6P09630 PGBD4P8-201ENST00000412993 562 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC068533.1-201ENST00000418542 415 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AL035407.1-201ENST00000429211 571 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 HMGN2P31-201ENST00000432430 273 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 MTND1P32-201ENST00000433043 938 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 PRDX3P3-201ENST00000447765 522 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 MTND4LP3-201ENST00000468320 276 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC037198.2-201ENST00000478845 733 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 RPL21P6-201ENST00000479171 504 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 PPIAP15-201ENST00000479662 484 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC108734.3-201ENST00000481241 1165 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC087369.1-201ENST00000520775 996 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC007991.1-201ENST00000522680 631 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.47□□□□□ -1.69
HOXC6P09630 AADACP1-206ENST00000561502 1193 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AC022069.1-201ENST00000582910 658 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 MRPS35P3-201ENST00000603189 709 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AL451044.1-201ENST00000604867 238 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AL139418.1-201ENST00000613613 177 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC024023.1-201ENST00000624530 922 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 AP002001.2-201ENST00000529025 1469 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC6P09630 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXC6P09630 AC083843.3-201ENST00000623679 2186 ntBASIC4.47□□□□□ -1.69
HOXC6P09630 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXC6P09630 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
HOXC6P09630 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXC6P09630 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC6P09630 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC6P09630 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC6P09630 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC6P09630 CASC19-284ENST00000642142 1868 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC6P09630 RNU6-157P-201ENST00000383957 107 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AL031779.1-201ENST00000415663 330 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC6P09630 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 MTND4P20-201ENST00000424125 869 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 DPY19L1P2-201ENST00000426647 915 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AP000907.1-201ENST00000428428 510 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 DLGAP5P1-201ENST00000430307 464 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC6P09630 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC6P09630 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 MTCO3P5-201ENST00000433620 714 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 ATP5C1P1-201ENST00000441945 895 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 AC007327.1-201ENST00000447461 264 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 SOD1P3-201ENST00000518682 454 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC6P09630 AC018442.3-201ENST00000523025 183 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC6P09630 AC025260.1-201ENST00000548858 430 ntBASIC4.46□□□□□ -1.7
HOXC6P09630 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms